Foldit

517: CASP ROLL Target R0008

Closed since about 14 years ago

Intermediate Overall Prediction

Summary

Created: February 16, 2012
Expires: February 22, 2012 at 21:00 UTC
Max points: 100

Description

CASP ROLL target R0008 is due in 3 weeks so we are starting you off with server predictions. Luckily, these server predictions are very similar to one another. Resetting the puzzle will cycle through 10 different server predictions that are also available in the Alignment Tool so you can use partial threading. The secondary structure predictions are posted in the puzzle comments.

Top groups

11. Freedom Folders 21 pts. 10,583
12. Gargleblasters 18 pts. 10,566
13. FoldIt@Netherlands 15 pts. 10,548
14. HMT heritage 12 pts. 10,513
15. chillerdown 10 pts. 10,489
16. Piratenpartei Deutschland 8 pts. 10,445
17. SETI.Germany 6 pts. 10,410
18. Mojo Risin' 5 pts. 10,397
19. Natural Abilities 4 pts. 10,349
20. Nerdfighters 3 pts. 10,343

321. boppa Lv 1 1 pt. 1,644
322. alex_book Lv 1 1 pt. 1,644
323. lalelu Lv 1 1 pt. 731
324. CharlieFortsConscience Lv 1 1 pt. 731
325. ingoneato Lv 1 1 pt. 0
326. mattmcfar Lv 1 1 pt. 0
327. siachen Lv 1 1 pt. 0
328. dimarfin Lv 1 1 pt. 0

Comments

beta_helix Staff Lv 1

February 16, 2012

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the Valine at residue 118 is predicted to be part of a sheet. However, the Valine at residue 16 is barely predicted to be in a helix.