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519: CASP ROLL Target R0009

Closed since about 14 years ago

Advanced Overall Prediction

Summary

Created
February 21, 2012
Expires
Max points
100
Description

The ninth CASP ROLL target, R0009, is unfortunately another big protein and again we are starting you off with server predictions. Resetting the puzzle will cycle through 10 different server predictions that are also available in the Alignment Tool so you can use partial threading. The secondary structure predictions are posted in the puzzle comments. If you have trouble loading this puzzle, try checking the box "disable network timeouts" when you login.

Top groups

  1. Avatar for Deleted group 21. Deleted group pts. 10,791
  2. Avatar for CHNO Junkies 22. CHNO Junkies 3 pts. 10,755
  3. Avatar for Deleted group 23. Deleted group pts. 10,480
  4. Avatar for Czech National Team 24. Czech National Team 2 pts. 10,308
  5. Avatar for Amestris Military 25. Amestris Military 1 pt. 10,173
  6. Avatar for Deleted group 26. Deleted group pts. 10,157
  7. Avatar for Nerdfighters 27. Nerdfighters 1 pt. 10,144
  8. Avatar for Piratenpartei Deutschland 28. Piratenpartei Deutschland 1 pt. 10,080
  9. Avatar for Eὕρηκα! Heureka! 29. Eὕρηκα! Heureka! 1 pt. 9,950
  10. Avatar for Team Commonwealth 30. Team Commonwealth 1 pt. 9,718
  1. Avatar for Salabaze 301. Salabaze Lv 1 1 pt. 8,830
  2. Avatar for KhAoSpiRit 302. KhAoSpiRit Lv 1 1 pt. 8,819
  3. Avatar for omrialka 303. omrialka Lv 1 1 pt. 8,818
  4. Avatar for Cosi 304. Cosi Lv 1 1 pt. 8,817
  5. Avatar for KubbiFang 305. KubbiFang Lv 1 1 pt. 8,803
  6. Avatar for Verchiel 306. Verchiel Lv 1 1 pt. 8,787
  7. Avatar for raclarke 307. raclarke Lv 1 1 pt. 8,771
  8. Avatar for FlereHe 308. FlereHe Lv 1 1 pt. 8,750
  9. Avatar for m3t3or 309. m3t3or Lv 1 1 pt. 8,739
  10. Avatar for Nonexistant 310. Nonexistant Lv 1 1 pt. 8,736

Comments

beta_helix Staff Lv 1

This puzzle is worth 150 global points!

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the Valine at residue 103 is highly predicted to be part of a sheet. However, the Valine at residue 169 is predicted to be anything.