519: CASP ROLL Target R0009

Closed since about 14 years ago

Summary

• Created: February 21, 2012
• Expires: March 03, 2012 at 15:00 UTC
• Max points: 100

Description

The ninth CASP ROLL target, R0009, is unfortunately another big protein and again we are starting you off with server predictions. Resetting the puzzle will cycle through 10 different server predictions that are also available in the Alignment Tool so you can use partial threading. The secondary structure predictions are posted in the puzzle comments. If you have trouble loading this puzzle, try checking the box "disable network timeouts" when you login.

Top groups

• 1. Anthropic Dreams 100 pts. 12,124
• 2. Contenders 88 pts. 12,108
• 3. Go Science 77 pts. 11,918
• 4. Void Crushers 68 pts. 11,917
• 5. xkcd 59 pts. 11,683
• 6. A970 51 pts. 11,602
• 7. foldeRNA 44 pts. 11,596
• 8. HMT heritage 38 pts. 11,573
• 9. L'Alliance Francophone 32 pts. 11,523
• 10. chillerdown 27 pts. 11,515

Top soloists

• 31. Eachus 68 pts. 11,623
• 32. grogar7 67 pts. 11,620
• 33. froggs554 66 pts. 11,606
• 34. Lemon Friend 65 pts. 11,602
• 35. brow42 64 pts. 11,601
• 36. bertro 64 pts. 11,596
• 37. dkmfan 63 pts. 11,595
• 38. rsosborne 62 pts. 11,592
• 39. chaos2 61 pts. 11,580
• 40. PRL 60 pts. 11,575

Comments

[beta_helix]

This puzzle is worth 150 global points!

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the Valine at residue 103 is highly predicted to be part of a sheet. However, the Valine at residue 169 is predicted to be anything.