Placeholder image of a protein
Icon representing a puzzle

536: CASP ROLL Target R0018

Closed since about 14 years ago

Intermediate Intermediate Overall Overall Prediction Prediction

Summary

Created
March 31, 2012
Expires
Max points
100
Description

We are starting you off with server predictions for CASP ROLL target R0018. Resetting the puzzle will cycle through 7 different server predictions (we have filtered out server predictions similar to one another). Please work on each of the 7 server models, not just the one that gets you the most points after a couple days. The other models might get you a better score eventually! The secondary structure predictions are posted in the puzzle comments.

Top groups

  1. Avatar for Freedom Folders 11. Freedom Folders 19 pts. 10,911
  2. Avatar for Atlanta 12. Atlanta 16 pts. 10,894
  3. Avatar for Russian team 13. Russian team 13 pts. 10,884
  4. Avatar for HMT heritage 14. HMT heritage 10 pts. 10,879
  5. Avatar for A970 15. A970 8 pts. 10,827
  6. Avatar for Natural Abilities 16. Natural Abilities 7 pts. 10,765
  7. Avatar for Richard Dawkins Foundation 17. Richard Dawkins Foundation 5 pts. 10,723
  8. Avatar for SETI.Germany 18. SETI.Germany 4 pts. 10,622
  9. Avatar for Deleted group 19. Deleted group pts. 10,618
  10. Avatar for Team Germany 20. Team Germany 2 pts. 10,580
  1. Avatar for bluecrab 181. bluecrab Lv 1 4 pts. 10,297
  2. Avatar for impixi 182. impixi Lv 1 4 pts. 10,297
  3. Avatar for ncm25_OLD 183. ncm25_OLD Lv 1 3 pts. 10,292
  4. Avatar for fabiobean 184. fabiobean Lv 1 3 pts. 10,291
  5. Avatar for mirjamvandelft 185. mirjamvandelft Lv 1 3 pts. 10,278
  6. Avatar for reefyrob 186. reefyrob Lv 1 3 pts. 10,272
  7. Avatar for Mozzi 187. Mozzi Lv 1 3 pts. 10,270
  8. Avatar for sbea3 188. sbea3 Lv 1 3 pts. 10,261
  9. Avatar for SimplySue 189. SimplySue Lv 1 3 pts. 10,258
  10. Avatar for 19Snoopy62 190. 19Snoopy62 Lv 1 3 pts. 10,253

Comments

beta_helix Staff Lv 1

This puzzle is worth 130 global points!

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the Leucines at residue 9 & 11 are highly predicted to be part of a helix. However, the Leucine at residue 76 is predicted to be in a loop or sheet.