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536: CASP ROLL Target R0018

Closed since about 14 years ago

Intermediate Intermediate Overall Overall Prediction Prediction

Summary

Created
March 31, 2012
Expires
Max points
100
Description

We are starting you off with server predictions for CASP ROLL target R0018. Resetting the puzzle will cycle through 7 different server predictions (we have filtered out server predictions similar to one another). Please work on each of the 7 server models, not just the one that gets you the most points after a couple days. The other models might get you a better score eventually! The secondary structure predictions are posted in the puzzle comments.

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Comments

beta_helix Staff Lv 1

This puzzle is worth 130 global points!

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the Leucines at residue 9 & 11 are highly predicted to be part of a helix. However, the Leucine at residue 76 is predicted to be in a loop or sheet.