Placeholder image of a protein
Icon representing a puzzle

600: CASP10 Target T0743

Closed since over 13 years ago

Intermediate Overall Prediction

Summary

Created
July 11, 2012
Expires
Max points
100
Description

Foldit's 600th puzzle is hopefully the last non-refinement CASP10 target! We are providing you with the top templates found by 3 different alignment programs. We will provide you with server predictions soon. More details about this CASP target are in the puzzle comments.

Top groups

  1. Avatar for FoldIt@Netherlands 11. FoldIt@Netherlands 9 pts. 10,743
  2. Avatar for Natural Abilities 12. Natural Abilities 7 pts. 10,718
  3. Avatar for putting the eat in meat 13. putting the eat in meat 5 pts. 10,554
  4. Avatar for Needles and Pins 14. Needles and Pins 4 pts. 10,470
  5. Avatar for Deleted group 15. Deleted group pts. 10,366
  6. Avatar for SETI.Germany 16. SETI.Germany 2 pts. 10,281
  7. Avatar for Mojo Risin' 17. Mojo Risin' 1 pt. 10,253
  8. Avatar for Russian team 18. Russian team 1 pt. 10,221
  9. Avatar for 7Monkeys 19. 7Monkeys 1 pt. 10,105
  10. Avatar for Skeptics Guide to the Universe 20. Skeptics Guide to the Universe 1 pt. 10,099
  1. Avatar for Deleted player 21. Deleted player pts. 11,193
  2. Avatar for mottiger 22. mottiger Lv 1 63 pts. 11,164
  3. Avatar for stg123123 23. stg123123 Lv 1 61 pts. 11,102
  4. Avatar for doug.ehlert 24. doug.ehlert Lv 1 60 pts. 11,087
  5. Avatar for gramps 25. gramps Lv 1 58 pts. 11,082
  6. Avatar for Galaxie 26. Galaxie Lv 1 57 pts. 11,075
  7. Avatar for christioanchauvin 27. christioanchauvin Lv 1 56 pts. 11,072
  8. Avatar for smilingone 28. smilingone Lv 1 54 pts. 11,072
  9. Avatar for enszyme 29. enszyme Lv 1 53 pts. 11,067
  10. Avatar for spdenne 30. spdenne Lv 1 52 pts. 11,035

Comments

beta_helix Staff Lv 1

Here is the CASP link for this target (showing the amino acid sequence):
http://predictioncenter.org/casp10/target.cgi?id=168
__________________

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the Leucines at residues 22, 28, 78, 91 & 94 are highly predicted to be in a helix. However, the Leucines at residues 109 & 144 are predicted to be in a sheet.
__________________

Link to template PDBs:

http://www.pdb.org/pdb/explore/explore.do?structureId=3fh1
http://www.pdb.org/pdb/explore/explore.do?structureId=2cw9
http://www.pdb.org/pdb/explore/explore.do?structureId=3k7c