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679b: De-novo Freestyle 20

Closed since about 13 years ago

Advanced Overall Prediction

Summary

Created
February 19, 2013
Expires
Max points
100
Description

We are giving you another currently unsolved protein as an extended chain. Use all your skills to fold it up as best as you can. The secondary structure predictions are provided on the starting model, with more details posted in the puzzle comments. This is a repost of Puzzle 679, you will be able to load in your manual saves from the previous version.

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Comments

beta_helix Staff Lv 1

Here is the CORRECT sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the Valines at residues 58, 70 & 83 are predicted to be part of a sheet, but the Valine at residue 90 is not.

The above predictions are already on the starting model (based on the horizontal lines in the above figure).
______________

NOTE: If you did not manually save a solution in puzzle 679, you can go back to 679, manually save it, and the solution should appear in your manual saves for this puzzle.

Puzzle was reposted due to this bug: http://fold.it/portal/node/994549

beta_helix Staff Lv 1

Due to the above bug (requiring this repost of the puzzle) and the fact that the other current puzzles are quite large (but the CASP ROLL puzzle deadlines cannot be extended) we have extended this puzzle's deadline.