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889: CASP11 Target T0769: Server Model

Closed since almost 12 years ago

Intermediate Intermediate Overall Overall Prediction Prediction CASP11 CASP11

Summary


Created
May 09, 2014
Expires
Max points
100
Description

This CASP11 target has 106 residues, and the Robetta server has converged on a single structure. We've provided the Robetta prediction as the starting model, but feel free to explore other structures! See the puzzle comments for secondary structure predictions.

Top groups


  1. Avatar for Italiani Al Lavoro 11. Italiani Al Lavoro 6 pts. 9,792
  2. Avatar for Deleted group 12. Deleted group pts. 9,762
  3. Avatar for FoldIt@Netherlands 13. FoldIt@Netherlands 3 pts. 9,721
  4. Avatar for SETI.Germany 16. SETI.Germany 1 pt. 9,617
  5. Avatar for Repro-men 17. Repro-men 1 pt. 9,569
  6. Avatar for Natural Abilities 18. Natural Abilities 1 pt. 9,568
  7. Avatar for It's over 9000! 19. It's over 9000! 1 pt. 9,536
  8. Avatar for Geekdo 20. Geekdo 1 pt. 9,407

  1. Avatar for vakobo 91. vakobo Lv 1 5 pts. 9,654
  2. Avatar for caglar 92. caglar Lv 1 5 pts. 9,645
  3. Avatar for KingLear 93. KingLear Lv 1 5 pts. 9,640
  4. Avatar for WBarme1234 94. WBarme1234 Lv 1 4 pts. 9,631
  5. Avatar for RyeSnake 95. RyeSnake Lv 1 4 pts. 9,631
  6. Avatar for Skippysk8s 96. Skippysk8s Lv 1 4 pts. 9,627
  7. Avatar for allie_heather47 97. allie_heather47 Lv 1 4 pts. 9,627
  8. Avatar for syoifczeri 98. syoifczeri Lv 1 4 pts. 9,625
  9. Avatar for silverberg 99. silverberg Lv 1 3 pts. 9,625
  10. Avatar for guineapig 100. guineapig Lv 1 3 pts. 9,621

Comments


bkoep Staff Lv 1

Here is the sequence logo predicted by the SAM server (ignore the last six Histidine residues, which are not present in this puzzle):

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

Note that these secondary structure predictions are not necessarily present in the server model that has been provided in the puzzle.
______

If you are a new Foldit player, please make sure you have completed all these tutorials before trying this puzzle:

  • lonely sheets,
  • lock and lower,
  • rebuild,
  • structure and rebuild,
  • control over clashing.

smilingone Lv 1

My first client shows 6 days, 20 hours expiring 5/16/14. My second client shows 4 days, 20 hours with an expiration date of 5/14/14 matching the puzzle page.

beta_helix Staff Lv 1

Yes, this puzzle was shortened since all 5 RosettaServer models are very similar to one another… and the CASP11 puzzles are going to start piling up soon! :-)