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889: CASP11 Target T0769: Server Model

Closed since almost 12 years ago

Intermediate Overall Prediction CASP11

Summary

Created
May 09, 2014
Expires
Max points
100
Description

This CASP11 target has 106 residues, and the Robetta server has converged on a single structure. We've provided the Robetta prediction as the starting model, but feel free to explore other structures! See the puzzle comments for secondary structure predictions.

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  1. Avatar for Team China 21. Team China 1 pt. 9,399
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  4. Avatar for incognito group 24. incognito group 1 pt. 8,674
  1. Avatar for jogie62 101. jogie62 Lv 1 3 pts. 9,617
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  10. Avatar for ralan-nsk 110. ralan-nsk Lv 1 2 pts. 9,578

Comments

bkoep Staff Lv 1

Here is the sequence logo predicted by the SAM server (ignore the last six Histidine residues, which are not present in this puzzle):

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

Note that these secondary structure predictions are not necessarily present in the server model that has been provided in the puzzle.
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If you are a new Foldit player, please make sure you have completed all these tutorials before trying this puzzle:

  • lonely sheets,
  • lock and lower,
  • rebuild,
  • structure and rebuild,
  • control over clashing.

smilingone Lv 1

My first client shows 6 days, 20 hours expiring 5/16/14. My second client shows 4 days, 20 hours with an expiration date of 5/14/14 matching the puzzle page.

beta_helix Staff Lv 1

Yes, this puzzle was shortened since all 5 RosettaServer models are very similar to one another… and the CASP11 puzzles are going to start piling up soon! :-)