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892: CASP11 Target T0773: Server Models

Closed since almost 12 years ago

Intermediate Overall Prediction CASP11

Summary

Created
May 14, 2014
Expires
Max points
100
Description

This CASP11 target has only 70 residues! We've provided you with 5 Robetta server models. Resetting the puzzle will cycle through each model and they are available in the Alignment Tool so you can use partial threading between them. See the puzzle comments for secondary structure predictions!

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Comments

beta_helix Staff Lv 1

Here is the RosettaServer link (including secondary structure information):
http://rosettaserver.bakerlab.org/results.jsp?id=48370

Here are the Starting Scores for this puzzle:
(press "Reset Puzzle" to cycle through each RosettaServer model):

  1. 8537.747
  2. 8511.046
  3. 6297.225
  4. 7992.411
  5. 7616.19

Secondary structure predictions from the SAM server will be posted soon…

bkoep Staff Lv 1

Here is the sequence logo predicted by the SAM server (ignore the last six Histidine residues, which are not present in this puzzle):

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

Note that these secondary structure predictions are not necessarily present in the server models that have been provided in the puzzle.
______

If you are a new Foldit player, please make sure you have completed all these tutorials before trying this puzzle:

  • lonely sheets,
  • lock and lower,
  • rebuild,
  • structure and rebuild,
  • control over clashing.