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920b: CASP11 Target Ts785: Sparse Data Contacts

Closed since over 11 years ago

Intermediate Overall Prediction CASP11 Predicted Contacts

Summary

Created
June 19, 2014
Expires
Max points
100
Description

NOTE: THIS PUZZLE IS CLOSING EARLIER THAN ORIGINALLY SCHEDULED! This puzzle is a repost of Puzzle 920 which included an erroneous contact map. The set of predicted contacts has been improved for this puzzle, and the Contact Filter has been activated. Players may load in solutions from Puzzle 920.

For this target, the CASP11 organizers have provided "sparse" experimental data about possible contacts in the protein. Contacts are scored with the Contact Map filter in this puzzle, and there is an upper limit of 950 possible points from the filter. The starting structure is an extended chain, and secondary structure predictions can be found below in the puzzle comments.

Top groups

  1. Avatar for Deleted group 11. Deleted group pts. 8,614
  2. Avatar for HMT heritage 12. HMT heritage 5 pts. 8,493
  3. Avatar for Repro-men 13. Repro-men 4 pts. 8,422
  4. Avatar for SETI.Germany 14. SETI.Germany 3 pts. 8,407
  5. Avatar for Piratenpartei Deutschland 15. Piratenpartei Deutschland 2 pts. 8,200
  6. Avatar for Italiani Al Lavoro 16. Italiani Al Lavoro 1 pt. 8,190
  7. Avatar for Mojo Risin' 17. Mojo Risin' 1 pt. 8,056
  8. Avatar for CHNO Junkies 18. CHNO Junkies 1 pt. 7,814
  9. Avatar for Natural Abilities 19. Natural Abilities 1 pt. 7,680
  10. Avatar for White-Browed Shrike-Babblers 20. White-Browed Shrike-Babblers 1 pt. 6,469
  1. Avatar for itboswelll 141. itboswelll Lv 1 1 pt. 5,568
  2. Avatar for MuckeMcFly 142. MuckeMcFly Lv 1 1 pt. 5,507
  3. Avatar for Close At Hand 143. Close At Hand Lv 1 1 pt. 5,425
  4. Avatar for PrettyPony2001 144. PrettyPony2001 Lv 1 1 pt. 4,929
  5. Avatar for guineapig 145. guineapig Lv 1 1 pt. 4,916
  6. Avatar for turbolag 146. turbolag Lv 1 1 pt. 4,895
  7. Avatar for aspadistra 147. aspadistra Lv 1 1 pt. 4,741
  8. Avatar for tallguy-13088 148. tallguy-13088 Lv 1 1 pt. 4,719
  9. Avatar for Bithalbierer 149. Bithalbierer Lv 1 1 pt. 4,486
  10. Avatar for jogie62 150. jogie62 Lv 1 1 pt. 4,468

Comments

bkoep Staff Lv 1

Here is the sequence logo predicted by the SAM server:

NOTE: Numbering is off as the first 2 residues were trimmed by CASP
H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.