926: CASP11 T0818: WeFold Round

Closed since over 11 years ago

Summary

• Created: June 26, 2014
• Expires: July 02, 2014 at 21:00 UTC
• Max points: 100

Description

For this 143 residue CASP11 Target, T0818, we are giving you 4 different server predictions selected by our WeFold collaborators. Resetting the puzzle will cycle through each model and they are available in the Alignment Tool so you can use partial threading between them. Secondary structure predictions are in the puzzle comments.

Top groups

• 11. Deleted group pts. 9,478
• 12. Italiani Al Lavoro 3 pts. 9,445
• 13. Repro-men 2 pts. 9,442
• 14. Natural Abilities 1 pt. 9,375
• 15. HMT heritage 1 pt. 9,339
• 16. Team Schleswig-Holstein 1 pt. 9,156
• 17. DSN @ Home 1 pt. 9,087
• 18. foldeRNA 1 pt. 9,067
• 19. Czech National Team 1 pt. 8,717
• 20. It's over 9000! 1 pt. 8,679

Top soloists

• 1. Timo van der Laan 100 pts. 10,089
• 2. Madde 98 pts. 10,071
• 3. Bruno Kestemont 96 pts. 10,065
• 4. gmn 93 pts. 9,986
• 5. gitwut 91 pts. 9,985
• 6. spmm 89 pts. 9,972
• 7. MurloW 87 pts. 9,958
• 8. karstenw 85 pts. 9,925
• 9. bertro 82 pts. 9,908
• 10. Hiro Protagonist 80 pts. 9,905

Comments

[beta_helix]

NOTE: Numbering is off as the first 23 residues were trimmed, so this secondary structure prediction might help:
http://rosettaserver.bakerlab.org/results.jsp?id=48924&p=1

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

Note that these secondary structure predictions are not necessarily present in the models that have been provided in the puzzle.