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926: CASP11 T0818: WeFold Round

Closed since almost 12 years ago

Intermediate Overall Prediction CASP11

Summary

Created
June 26, 2014
Expires
Max points
100
Description

For this 143 residue CASP11 Target, T0818, we are giving you 4 different server predictions selected by our WeFold collaborators. Resetting the puzzle will cycle through each model and they are available in the Alignment Tool so you can use partial threading between them. Secondary structure predictions are in the puzzle comments.

Top groups

  1. Avatar for SETI.Germany 21. SETI.Germany 1 pt. 8,647
  2. Avatar for Deleted group 22. Deleted group pts. 8,646
  1. Avatar for AsDawnBreaks 121. AsDawnBreaks Lv 1 2 pts. 8,993
  2. Avatar for guineapig 122. guineapig Lv 1 2 pts. 8,986
  3. Avatar for parsnip 123. parsnip Lv 1 2 pts. 8,983
  4. Avatar for Pro Lapser 124. Pro Lapser Lv 1 2 pts. 8,980
  5. Avatar for MuckeMcFly 125. MuckeMcFly Lv 1 1 pt. 8,979
  6. Avatar for goastano 126. goastano Lv 1 1 pt. 8,963
  7. Avatar for Chrisbe2 127. Chrisbe2 Lv 1 1 pt. 8,956
  8. Avatar for NycteaSandiaca 128. NycteaSandiaca Lv 1 1 pt. 8,954
  9. Avatar for dbuske 129. dbuske Lv 1 1 pt. 8,953
  10. Avatar for leehaggis 130. leehaggis Lv 1 1 pt. 8,938

Comments

beta_helix Staff Lv 1

NOTE: Numbering is off as the first 23 residues were trimmed, so this secondary structure prediction might help:
http://rosettaserver.bakerlab.org/results.jsp?id=48924&p=1

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

Note that these secondary structure predictions are not necessarily present in the models that have been provided in the puzzle.