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926: CASP11 T0818: WeFold Round

Closed since almost 12 years ago

Intermediate Overall Prediction CASP11

Summary

Created
June 26, 2014
Expires
Max points
100
Description

For this 143 residue CASP11 Target, T0818, we are giving you 4 different server predictions selected by our WeFold collaborators. Resetting the puzzle will cycle through each model and they are available in the Alignment Tool so you can use partial threading between them. Secondary structure predictions are in the puzzle comments.

Top groups

  1. Avatar for SETI.Germany 21. SETI.Germany 1 pt. 8,647
  2. Avatar for Deleted group 22. Deleted group pts. 8,646
  1. Avatar for poaceae 131. poaceae Lv 1 1 pt. 8,932
  2. Avatar for alwen 132. alwen Lv 1 1 pt. 8,925
  3. Avatar for Altercomp 133. Altercomp Lv 1 1 pt. 8,920
  4. Avatar for Deleted player 134. Deleted player pts. 8,907
  5. Avatar for SouperGenious 135. SouperGenious Lv 1 1 pt. 8,891
  6. Avatar for Close At Hand 136. Close At Hand Lv 1 1 pt. 8,880
  7. Avatar for Snake bite 137. Snake bite Lv 1 1 pt. 8,871
  8. Avatar for rinze 138. rinze Lv 1 1 pt. 8,864
  9. Avatar for jogie62 139. jogie62 Lv 1 1 pt. 8,863
  10. Avatar for may of rose 140. may of rose Lv 1 1 pt. 8,833

Comments

beta_helix Staff Lv 1

NOTE: Numbering is off as the first 23 residues were trimmed, so this secondary structure prediction might help:
http://rosettaserver.bakerlab.org/results.jsp?id=48924&p=1

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

Note that these secondary structure predictions are not necessarily present in the models that have been provided in the puzzle.