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926: CASP11 T0818: WeFold Round

Closed since almost 12 years ago

Intermediate Overall Prediction CASP11

Summary

Created
June 26, 2014
Expires
Max points
100
Description

For this 143 residue CASP11 Target, T0818, we are giving you 4 different server predictions selected by our WeFold collaborators. Resetting the puzzle will cycle through each model and they are available in the Alignment Tool so you can use partial threading between them. Secondary structure predictions are in the puzzle comments.

Top groups

  1. Avatar for SETI.Germany 21. SETI.Germany 1 pt. 8,647
  2. Avatar for Deleted group 22. Deleted group pts. 8,646
  1. Avatar for Deleted player 161. Deleted player pts. 8,646
  2. Avatar for tela 162. tela Lv 1 1 pt. 8,638
  3. Avatar for bookwormmegan96@hotmail.com 163. bookwormmegan96@hotmail.com Lv 1 1 pt. 8,626
  4. Avatar for mjenuwine 164. mjenuwine Lv 1 1 pt. 8,583
  5. Avatar for n.auffermann 165. n.auffermann Lv 1 1 pt. 8,570
  6. Avatar for Sydefecks 166. Sydefecks Lv 1 1 pt. 8,565
  7. Avatar for ManVsYard 167. ManVsYard Lv 1 1 pt. 8,562
  8. Avatar for momadoc 168. momadoc Lv 1 1 pt. 8,540
  9. Avatar for frank_6363 169. frank_6363 Lv 1 1 pt. 8,506
  10. Avatar for MaartenDesnouck 170. MaartenDesnouck Lv 1 1 pt. 8,478

Comments

beta_helix Staff Lv 1

NOTE: Numbering is off as the first 23 residues were trimmed, so this secondary structure prediction might help:
http://rosettaserver.bakerlab.org/results.jsp?id=48924&p=1

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

Note that these secondary structure predictions are not necessarily present in the models that have been provided in the puzzle.