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929: CASP11 T0820: WeFold Round

Closed since almost 12 years ago

Intermediate Overall Prediction CASP11

Summary


Created
June 29, 2014
Expires
Max points
100
Description

For this 140 residue CASP11 Target, T0820, we are giving you 5 different server predictions selected by our WeFold collaborators. Resetting the puzzle will cycle through each model and they are available in the Alignment Tool so you can use partial threading between them. Secondary structure predictions are in the puzzle comments.

Top groups


  1. Avatar for Deleted group 11. Deleted group pts. 9,457
  2. Avatar for Italiani Al Lavoro 12. Italiani Al Lavoro 4 pts. 9,445
  3. Avatar for Russian team 13. Russian team 3 pts. 9,371
  4. Avatar for Repro-men 14. Repro-men 2 pts. 9,206
  5. Avatar for SETI.Germany 15. SETI.Germany 1 pt. 9,067
  6. Avatar for Natural Abilities 16. Natural Abilities 1 pt. 9,015
  7. Avatar for It's over 9000! 17. It's over 9000! 1 pt. 9,010
  8. Avatar for foldeRNA 19. foldeRNA 1 pt. 8,550
  9. Avatar for Team China 20. Team China 1 pt. 8,405

  1. Avatar for Hiro Protagonist 51. Hiro Protagonist Lv 1 21 pts. 9,310
  2. Avatar for SKSbell 52. SKSbell Lv 1 20 pts. 9,294
  3. Avatar for sheerbliss 53. sheerbliss Lv 1 20 pts. 9,287
  4. Avatar for crpainter 54. crpainter Lv 1 19 pts. 9,282
  5. Avatar for deLaCeiba 55. deLaCeiba Lv 1 18 pts. 9,255
  6. Avatar for spdenne 56. spdenne Lv 1 18 pts. 9,248
  7. Avatar for joremen 57. joremen Lv 1 17 pts. 9,248
  8. Avatar for silverberg 58. silverberg Lv 1 16 pts. 9,240
  9. Avatar for pgiles 59. pgiles Lv 1 16 pts. 9,233
  10. Avatar for BackupElk 60. BackupElk Lv 1 15 pts. 9,232

Comments


beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

Note that these secondary structure predictions are not necessarily present in the models that have been provided in the puzzle.