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929: CASP11 T0820: WeFold Round

Closed since almost 12 years ago

Intermediate Intermediate Overall Overall Prediction Prediction CASP11 CASP11

Summary

Created
June 29, 2014
Expires
Max points
100
Description

For this 140 residue CASP11 Target, T0820, we are giving you 5 different server predictions selected by our WeFold collaborators. Resetting the puzzle will cycle through each model and they are available in the Alignment Tool so you can use partial threading between them. Secondary structure predictions are in the puzzle comments.

Top groups

  1. Avatar for CHNO Junkies 21. CHNO Junkies 1 pt. 8,384
  2. Avatar for Deleted group 22. Deleted group pts. 8,371
  3. Avatar for DSN @ Home 23. DSN @ Home 1 pt. 8,366
  4. Avatar for incognito group 24. incognito group 1 pt. 0
  1. Avatar for greepski 11. greepski Lv 1 76 pts. 9,685
  2. Avatar for gmn 12. gmn Lv 1 74 pts. 9,677
  3. Avatar for retiredmichael 13. retiredmichael Lv 1 72 pts. 9,676
  4. Avatar for spmm 14. spmm Lv 1 70 pts. 9,652
  5. Avatar for mbinfield 15. mbinfield Lv 1 68 pts. 9,632
  6. Avatar for wisky 16. wisky Lv 1 66 pts. 9,624
  7. Avatar for Susume 17. Susume Lv 1 64 pts. 9,613
  8. Avatar for karstenw 18. karstenw Lv 1 62 pts. 9,611
  9. Avatar for mirp 19. mirp Lv 1 60 pts. 9,586
  10. Avatar for Timo van der Laan 20. Timo van der Laan Lv 1 59 pts. 9,556

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

Note that these secondary structure predictions are not necessarily present in the models that have been provided in the puzzle.