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930: CASP11 T0822: WeFold Round

Closed since over 11 years ago

Intermediate Overall Prediction CASP11

Summary

Created
June 29, 2014
Expires
Max points
100
Description

For this 115 residue CASP11 Target, T0822, we are giving you 3 different server predictions selected by our WeFold collaborators. Resetting the puzzle will cycle through each model and they are available in the Alignment Tool so you can use partial threading between them. Secondary structure predictions are in the puzzle comments.

Top groups

  1. Avatar for Anthropic Dreams
    1. Anthropic Dreams
    100 pts. 9,212
  2. Avatar for Beta Folders 2. Beta Folders 79 pts. 9,183
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  4. Avatar for Gargleblasters 4. Gargleblasters 47 pts. 9,112
  5. Avatar for Go Science 5. Go Science 35 pts. 9,066
  6. Avatar for L'Alliance Francophone 6. L'Alliance Francophone 26 pts. 9,028
  7. Avatar for Contenders 7. Contenders 19 pts. 9,005
  8. Avatar for Repro-men 8. Repro-men 14 pts. 8,976
  9. Avatar for HMT heritage 9. HMT heritage 10 pts. 8,915
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  1. Avatar for momadoc 131. momadoc Lv 1 1 pt. 8,404
  2. Avatar for Close At Hand 132. Close At Hand Lv 1 1 pt. 8,397
  3. Avatar for Bletchley Park 133. Bletchley Park Lv 1 1 pt. 8,381
  4. Avatar for ManVsYard 134. ManVsYard Lv 1 1 pt. 8,377
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  7. Avatar for dbuske 137. dbuske Lv 1 1 pt. 8,334
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  9. Avatar for emdee314 139. emdee314 Lv 1 1 pt. 8,314
  10. Avatar for Jaco van As 140. Jaco van As Lv 1 1 pt. 8,299

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

Note that these secondary structure predictions are not necessarily present in the models that have been provided in the puzzle.