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931: CASP11 T0824: WeFold Round

Closed since almost 12 years ago

Intermediate Overall Prediction CASP11

Summary

Created: June 30, 2014
Expires: July 07, 2014 at 10:00 UTC
Max points: 100

Description

For this 110 residue CASP11 Target, T0824, we are starting you off with 3 different server predictions selected by our WeFold collaborators. Resetting the puzzle will cycle through each model and they are available in the Alignment Tool so you can use partial threading between them. Secondary structure predictions are in the puzzle comments.

Top groups

11. Deleted group pts. 8,928
12. Italiani Al Lavoro 2 pts. 8,896
13. HMT heritage 2 pts. 8,886
14. SETI.Germany 1 pt. 8,711
15. Team Mexico 1 pt. 8,693
16. Natural Abilities 1 pt. 8,492
17. Team Schleswig-Holstein 1 pt. 8,099
18. Deleted group pts. 7,918
19. DSN @ Home 1 pt. 7,877
20. xkcd 1 pt. 7,669

41. eboppterp Lv 1 28 pts. 9,052
42. nemo7731 Lv 1 27 pts. 9,033
43. Deleted player pts. 9,032
44. egran48 Lv 1 25 pts. 9,032
45. Mike Cassidy Lv 1 24 pts. 9,024
46. Hiro Protagonist Lv 1 24 pts. 9,022
47. g_b Lv 1 23 pts. 9,016
48. hpaege Lv 1 22 pts. 9,005
49. reefyrob Lv 1 21 pts. 9,002
50. crpainter Lv 1 20 pts. 8,995

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

Note that these secondary structure predictions are not necessarily present in the models that have been provided in the puzzle.