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931: CASP11 T0824: WeFold Round

Closed since almost 12 years ago

Intermediate Overall Prediction CASP11

Summary

Created
June 30, 2014
Expires
Max points
100
Description

For this 110 residue CASP11 Target, T0824, we are starting you off with 3 different server predictions selected by our WeFold collaborators. Resetting the puzzle will cycle through each model and they are available in the Alignment Tool so you can use partial threading between them. Secondary structure predictions are in the puzzle comments.

Top groups

  1. Avatar for CHNO Junkies 21. CHNO Junkies 1 pt. 0
  1. Avatar for frostschutz 91. frostschutz Lv 1 3 pts. 8,711
  2. Avatar for biochemist93 92. biochemist93 Lv 1 3 pts. 8,703
  3. Avatar for javatlacati 93. javatlacati Lv 1 3 pts. 8,693
  4. Avatar for Merf 94. Merf Lv 1 3 pts. 8,680
  5. Avatar for k4t0n1 95. k4t0n1 Lv 1 3 pts. 8,679
  6. Avatar for ViJay7019 96. ViJay7019 Lv 1 3 pts. 8,668
  7. Avatar for PrettyPony2001 97. PrettyPony2001 Lv 1 3 pts. 8,660
  8. Avatar for brgreening 98. brgreening Lv 1 2 pts. 8,657
  9. Avatar for harvardman 99. harvardman Lv 1 2 pts. 8,651
  10. Avatar for ivalnic 100. ivalnic Lv 1 2 pts. 8,645

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

Note that these secondary structure predictions are not necessarily present in the models that have been provided in the puzzle.