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931: CASP11 T0824: WeFold Round

Closed since almost 12 years ago

Intermediate Overall Prediction CASP11

Summary

Created
June 30, 2014
Expires
Max points
100
Description

For this 110 residue CASP11 Target, T0824, we are starting you off with 3 different server predictions selected by our WeFold collaborators. Resetting the puzzle will cycle through each model and they are available in the Alignment Tool so you can use partial threading between them. Secondary structure predictions are in the puzzle comments.

Top groups

  1. Avatar for CHNO Junkies 21. CHNO Junkies 1 pt. 0
  1. Avatar for may of rose 151. may of rose Lv 1 1 pt. 8,227
  2. Avatar for alwen 152. alwen Lv 1 1 pt. 8,190
  3. Avatar for poaceae 153. poaceae Lv 1 1 pt. 8,180
  4. Avatar for NycteaSandiaca 154. NycteaSandiaca Lv 1 1 pt. 8,170
  5. Avatar for dbuske 155. dbuske Lv 1 1 pt. 8,115
  6. Avatar for MuckeMcFly 156. MuckeMcFly Lv 1 1 pt. 8,099
  7. Avatar for nmos1056 157. nmos1056 Lv 1 1 pt. 8,080
  8. Avatar for Tac1 158. Tac1 Lv 1 1 pt. 8,045
  9. Avatar for Psych0Active 159. Psych0Active Lv 1 1 pt. 7,967
  10. Avatar for Mlevanic 160. Mlevanic Lv 1 1 pt. 7,966

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

Note that these secondary structure predictions are not necessarily present in the models that have been provided in the puzzle.