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931: CASP11 T0824: WeFold Round

Closed since almost 12 years ago

Intermediate Intermediate Overall Overall Prediction Prediction CASP11 CASP11

Summary

Created
June 30, 2014
Expires
Max points
100
Description

For this 110 residue CASP11 Target, T0824, we are starting you off with 3 different server predictions selected by our WeFold collaborators. Resetting the puzzle will cycle through each model and they are available in the Alignment Tool so you can use partial threading between them. Secondary structure predictions are in the puzzle comments.

Top groups

  1. Avatar for CHNO Junkies 21. CHNO Junkies 1 pt. 0
  1. Avatar for pmlkjn 171. pmlkjn Lv 1 1 pt. 0
  2. Avatar for boondog 172. boondog Lv 1 1 pt. 0
  3. Avatar for puxatudo 173. puxatudo Lv 1 1 pt. 0
  4. Avatar for vered 174. vered Lv 1 1 pt. 0
  5. Avatar for matosfran 175. matosfran Lv 1 1 pt. 0
  6. Avatar for histon 176. histon Lv 1 1 pt. 0
  7. Avatar for mbinfield 177. mbinfield Lv 1 1 pt. 0
  8. Avatar for packer 178. packer Lv 1 1 pt. 0

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

Note that these secondary structure predictions are not necessarily present in the models that have been provided in the puzzle.