938: CASP11 T0838: WeFold Round

Closed since over 11 years ago

Summary

• Created: July 14, 2014
• Expires: July 20, 2014 at 21:00 UTC
• Max points: 100

Description

For this 133 residue CASP11 Target, T0838, we are giving you 2 different server predictions selected by our WeFold collaborators. Resetting the puzzle will cycle between both aligned models and they are available in the Alignment Tool so you can use partial threading between them. Secondary structure predictions are in the puzzle comments.

Top groups

• 1. Anthropic Dreams 100 pts. 10,075
• 2. Beta Folders 79 pts. 10,047
• 3. Go Science 61 pts. 9,915
• 4. Contenders 47 pts. 9,912
• 5. L'Alliance Francophone 35 pts. 9,902
• 6. Gargleblasters 26 pts. 9,887
• 7. Void Crushers 19 pts. 9,884
• 8. Repro-men 14 pts. 9,836
• 9. Deleted group pts. 9,834
• 10. Russian team 7 pts. 9,760

Top evolvers

• 1. Galaxie 100 pts. 10,075
• 2. jamiexq 89 pts. 10,065
• 3. gmn 78 pts. 10,063
• 4. MaartenDesnouck 69 pts. 10,062
• 5. Vredeman 60 pts. 10,060
• 6. gdnskye 53 pts. 10,058
• 7. nemo7731 46 pts. 10,056
• 8. viosca 40 pts. 10,048
• 9. grogar7 34 pts. 10,047
• 10. MurloW 29 pts. 10,047

Comments

[beta_helix]

NOTE: Numbering is off as the first 21 residues were trimmed, so this secondary structure prediction might help:
http://rosettaserver.bakerlab.org/results.jsp?id=49285&p=1

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

Note that these secondary structure predictions are not necessarily present in the models that have been provided in the puzzle.