938: CASP11 T0838: WeFold Round

Closed since over 11 years ago

Summary

• Created: July 14, 2014
• Expires: July 20, 2014 at 21:00 UTC
• Max points: 100

Description

For this 133 residue CASP11 Target, T0838, we are giving you 2 different server predictions selected by our WeFold collaborators. Resetting the puzzle will cycle between both aligned models and they are available in the Alignment Tool so you can use partial threading between them. Secondary structure predictions are in the puzzle comments.

Top groups

• 1. Anthropic Dreams 100 pts. 10,075
• 2. Beta Folders 79 pts. 10,047
• 3. Go Science 61 pts. 9,915
• 4. Contenders 47 pts. 9,912
• 5. L'Alliance Francophone 35 pts. 9,902
• 6. Gargleblasters 26 pts. 9,887
• 7. Void Crushers 19 pts. 9,884
• 8. Repro-men 14 pts. 9,836
• 9. Deleted group pts. 9,834
• 10. Russian team 7 pts. 9,760

Top soloists

• 31. tomespen 48 pts. 9,819
• 32. christioanchauvin 47 pts. 9,815
• 33. pauldunn 46 pts. 9,811
• 34. pvc78 45 pts. 9,808
• 35. grogar7 43 pts. 9,806
• 36. drjr 42 pts. 9,805
• 37. Bruno Kestemont 41 pts. 9,795
• 38. bob1928 40 pts. 9,788
• 39. bertro 39 pts. 9,784
• 40. Flagg65a 38 pts. 9,781

Comments

[beta_helix]

NOTE: Numbering is off as the first 21 residues were trimmed, so this secondary structure prediction might help:
http://rosettaserver.bakerlab.org/results.jsp?id=49285&p=1

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

Note that these secondary structure predictions are not necessarily present in the models that have been provided in the puzzle.