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941: CASP11 T0842: WeFold Round

Closed since over 11 years ago

Intermediate Overall Prediction CASP11

Summary

Created
July 15, 2014
Expires
Max points
100
Description

For this 138 residue CASP11 Target, T0842, we are giving you 4 different server predictions selected by our WeFold collaborators. Resetting the puzzle will cycle between each aligned model and they are available in the Alignment Tool so you can use partial threading between them. Secondary structure predictions are in the puzzle comments.

Top groups

  1. Avatar for FoldIt@Netherlands 11. FoldIt@Netherlands 7 pts. 9,610
  2. Avatar for Italiani Al Lavoro 12. Italiani Al Lavoro 5 pts. 9,555
  3. Avatar for Deleted group 13. Deleted group pts. 9,448
  4. Avatar for Deleted group 14. Deleted group pts. 9,318
  5. Avatar for Team Mexico 15. Team Mexico 2 pts. 9,267
  6. Avatar for Natural Abilities 16. Natural Abilities 1 pt. 9,257
  7. Avatar for SETI.Germany 17. SETI.Germany 1 pt. 9,147
  8. Avatar for Eὕρηκα! Heureka! 18. Eὕρηκα! Heureka! 1 pt. 9,079
  9. Avatar for Team Schleswig-Holstein 19. Team Schleswig-Holstein 1 pt. 8,998
  10. Avatar for Geekdo 20. Geekdo 1 pt. 8,912
  1. Avatar for franse 181. franse Lv 1 1 pt. 8,625
  2. Avatar for Altercomp 182. Altercomp Lv 1 1 pt. 8,596
  3. Avatar for Aliceateum 183. Aliceateum Lv 1 1 pt. 8,588
  4. Avatar for erynn 184. erynn Lv 1 1 pt. 8,552
  5. Avatar for mirjamvandelft 185. mirjamvandelft Lv 1 1 pt. 8,551
  6. Avatar for wayne51782 186. wayne51782 Lv 1 1 pt. 8,516
  7. Avatar for nmos1056 187. nmos1056 Lv 1 1 pt. 8,487
  8. Avatar for Bigbird1 188. Bigbird1 Lv 1 1 pt. 8,485
  9. Avatar for persephone977 189. persephone977 Lv 1 1 pt. 8,466
  10. Avatar for aspadistra 190. aspadistra Lv 1 1 pt. 8,465

Comments

beta_helix Staff Lv 1

NOTE: Numbering is off as the first 8 residues were trimmed, so this secondary structure prediction might help:
http://rosettaserver.bakerlab.org/results.jsp?id=49312&p=1

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

Note that these secondary structure predictions are not necessarily present in the models that have been provided in the puzzle.