941: CASP11 T0842: WeFold Round

Closed since over 11 years ago

Summary

• Created: July 15, 2014
• Expires: July 22, 2014 at 22:00 UTC
• Max points: 100

Description

For this 138 residue CASP11 Target, T0842, we are giving you 4 different server predictions selected by our WeFold collaborators. Resetting the puzzle will cycle between each aligned model and they are available in the Alignment Tool so you can use partial threading between them. Secondary structure predictions are in the puzzle comments.

Top groups

• 1. Go Science 100 pts. 9,969
• 2. Contenders 81 pts. 9,943
• 3. Beta Folders 65 pts. 9,937
• 4. Anthropic Dreams 52 pts. 9,935
• 5. Void Crushers 41 pts. 9,880
• 6. Repro-men 32 pts. 9,803
• 7. Russian team 24 pts. 9,756
• 8. L'Alliance Francophone 18 pts. 9,750
• 9. HMT heritage 14 pts. 9,713
• 10. Gargleblasters 10 pts. 9,708

Top soloists

• 31. O Seki To 47 pts. 9,712
• 32. Antibrad 45 pts. 9,711
• 33. greepski 44 pts. 9,708
• 34. tomespen 43 pts. 9,706
• 35. Vredeman 42 pts. 9,702
• 36. Deleted player pts. 9,694
• 37. Ashrai 40 pts. 9,664
• 38. drjr 38 pts. 9,656
• 39. MaartenDesnouck 37 pts. 9,653
• 40. Deleted player 36 pts. 9,650

Comments

[beta_helix]

NOTE: Numbering is off as the first 8 residues were trimmed, so this secondary structure prediction might help:
http://rosettaserver.bakerlab.org/results.jsp?id=49312&p=1

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

Note that these secondary structure predictions are not necessarily present in the models that have been provided in the puzzle.