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942: CASP11 T0837: WeFold Round

Closed since over 11 years ago

Intermediate Overall Prediction CASP11

Summary

Created: July 17, 2014
Expires: July 24, 2014 at 23:59 UTC
Max points: 100

Description

For this 128 residue CASP11 Target, T0837, we are starting you off with 3 different server predictions selected by our WeFold collaborators. Resetting the puzzle will cycle between each aligned model and they are available in the Alignment Tool so you can use partial threading between them. Secondary structure predictions are in the puzzle comments.

Top groups

11. Russian team 5 pts. 9,453
12. Repro-men 4 pts. 9,322
13. Deleted group pts. 9,281
14. Italiani Al Lavoro 2 pts. 9,275
15. SETI.Germany 1 pt. 9,274
16. Natural Abilities 1 pt. 9,103
17. Team Schleswig-Holstein 1 pt. 8,931
18. Geekdo 1 pt. 8,885
19. Minions of TWIS 1 pt. 8,819
20. Crunching Family 1 pt. 8,578

1. BitSpawn Lv 1
100 pts. 9,841
2. wisky Lv 1 98 pts. 9,805
3. Galaxie Lv 1 96 pts. 9,802
4. gmn Lv 1 94 pts. 9,800
5. Madde Lv 1 92 pts. 9,781
6. gitwut Lv 1 89 pts. 9,773
7. grogar7 Lv 1 87 pts. 9,763
8. LociOiling Lv 1 85 pts. 9,746
9. Vredeman Lv 1 83 pts. 9,738
10. auntdeen Lv 1 81 pts. 9,728

Comments

NTree649 Staff Lv 1

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

Note that these secondary structure predictions are not necessarily present in the models that have been provided in the puzzle.