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944: CASP11 T0846: WeFold Round

Closed since over 11 years ago

Intermediate Overall Prediction CASP11

Summary

Created
July 20, 2014
Expires
Max points
100
Description

For this 138 residue CASP11 Target, T0846, we are starting you off with 3 different server predictions selected by our WeFold collaborators. Resetting the puzzle will cycle between each aligned model and they are available in the Alignment Tool so you can use partial threading between them. Secondary structure predictions are in the puzzle comments.

Top groups

  1. Avatar for Italiani Al Lavoro 11. Italiani Al Lavoro 4 pts. 9,520
  2. Avatar for FoldIt@Netherlands 12. FoldIt@Netherlands 2 pts. 9,509
  3. Avatar for Deleted group 13. Deleted group pts. 9,417
  4. Avatar for Deleted group 14. Deleted group pts. 9,339
  5. Avatar for Deleted group 15. Deleted group pts. 9,267
  6. Avatar for SETI.Germany 16. SETI.Germany 1 pt. 9,225
  7. Avatar for Natural Abilities 17. Natural Abilities 1 pt. 9,135
  8. Avatar for Team Schleswig-Holstein 18. Team Schleswig-Holstein 1 pt. 9,049
  9. Avatar for Minions of TWIS 19. Minions of TWIS 1 pt. 9,038
  10. Avatar for DSN @ Home 20. DSN @ Home 1 pt. 8,561
  1. Avatar for emdee314 151. emdee314 Lv 1 1 pt. 8,809
  2. Avatar for Ciccillo 152. Ciccillo Lv 1 1 pt. 8,785
  3. Avatar for Sydefecks 153. Sydefecks Lv 1 1 pt. 8,750
  4. Avatar for Pibeagles 154. Pibeagles Lv 1 1 pt. 8,748
  5. Avatar for momadoc 155. momadoc Lv 1 1 pt. 8,742
  6. Avatar for frezae 156. frezae Lv 1 1 pt. 8,738
  7. Avatar for perrystaff 157. perrystaff Lv 1 1 pt. 8,727
  8. Avatar for ralan-nsk 158. ralan-nsk Lv 1 1 pt. 8,725
  9. Avatar for parsnip 159. parsnip Lv 1 1 pt. 8,689
  10. Avatar for frozenice9 160. frozenice9 Lv 1 1 pt. 8,669

Comments

NTree649 Staff Lv 1

NOTE: Numbering is off as the first 8 residues were trimmed, so this secondary structure prediction might help:
http://rosettaserver.bakerlab.org/results.jsp?id=49383&p=1

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

Note that these secondary structure predictions are not necessarily present in the models that have been provided in the puzzle.