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944: CASP11 T0846: WeFold Round

Closed since over 11 years ago

Intermediate Overall Prediction CASP11

Summary

Created
July 20, 2014
Expires
Max points
100
Description

For this 138 residue CASP11 Target, T0846, we are starting you off with 3 different server predictions selected by our WeFold collaborators. Resetting the puzzle will cycle between each aligned model and they are available in the Alignment Tool so you can use partial threading between them. Secondary structure predictions are in the puzzle comments.

Top groups

  1. Avatar for Italiani Al Lavoro 11. Italiani Al Lavoro 4 pts. 9,520
  2. Avatar for FoldIt@Netherlands 12. FoldIt@Netherlands 2 pts. 9,509
  3. Avatar for Deleted group 13. Deleted group pts. 9,417
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  5. Avatar for Deleted group 15. Deleted group pts. 9,267
  6. Avatar for SETI.Germany 16. SETI.Germany 1 pt. 9,225
  7. Avatar for Natural Abilities 17. Natural Abilities 1 pt. 9,135
  8. Avatar for Team Schleswig-Holstein 18. Team Schleswig-Holstein 1 pt. 9,049
  9. Avatar for Minions of TWIS 19. Minions of TWIS 1 pt. 9,038
  10. Avatar for DSN @ Home 20. DSN @ Home 1 pt. 8,561
  1. Avatar for Tac1 171. Tac1 Lv 1 1 pt. 8,531
  2. Avatar for MadnessX 172. MadnessX Lv 1 1 pt. 8,497
  3. Avatar for BrianHastingsMD 173. BrianHastingsMD Lv 1 1 pt. 8,493
  4. Avatar for persephone977 174. persephone977 Lv 1 1 pt. 8,483
  5. Avatar for wayne51782 175. wayne51782 Lv 1 1 pt. 8,465
  6. Avatar for cassandraberry81897 176. cassandraberry81897 Lv 1 1 pt. 8,449
  7. Avatar for stephmau 177. stephmau Lv 1 1 pt. 8,427
  8. Avatar for Takara 178. Takara Lv 1 1 pt. 8,405
  9. Avatar for heyubob2 179. heyubob2 Lv 1 1 pt. 8,350
  10. Avatar for wuhongyi 180. wuhongyi Lv 1 1 pt. 8,309

Comments

NTree649 Staff Lv 1

NOTE: Numbering is off as the first 8 residues were trimmed, so this secondary structure prediction might help:
http://rosettaserver.bakerlab.org/results.jsp?id=49383&p=1

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

Note that these secondary structure predictions are not necessarily present in the models that have been provided in the puzzle.