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946: CASP11 T0853: WeFold Round

Closed since over 11 years ago

Intermediate Overall Prediction CASP11

Summary


Created
July 23, 2014
Expires
Max points
100
Description

For this 152 residue CASP11 Target, T0853, we are giving you 3 different server predictions selected by our WeFold collaborators. Resetting the puzzle will cycle through each model and they are available in the Alignment Tool so you can use partial threading between them. Secondary structure predictions are in the puzzle comments.

Top groups


  1. Avatar for Italiani Al Lavoro 11. Italiani Al Lavoro 4 pts. 9,737
  2. Avatar for Deleted group 12. Deleted group pts. 9,724
  3. Avatar for HMT heritage 13. HMT heritage 2 pts. 9,682
  4. Avatar for Deleted group 14. Deleted group pts. 9,678
  5. Avatar for Deleted group 15. Deleted group pts. 9,615
  6. Avatar for Ukraine 17. Ukraine 1 pt. 9,588
  7. Avatar for Natural Abilities 18. Natural Abilities 1 pt. 9,585
  8. Avatar for SETI.Germany 19. SETI.Germany 1 pt. 9,546
  9. Avatar for Deleted group 20. Deleted group pts. 9,369

  1. Avatar for gitwut 11. gitwut Lv 1 78 pts. 9,938
  2. Avatar for Vredeman 12. Vredeman Lv 1 76 pts. 9,924
  3. Avatar for mirp 13. mirp Lv 1 74 pts. 9,916
  4. Avatar for BitSpawn 14. BitSpawn Lv 1 72 pts. 9,899
  5. Avatar for spvincent 15. spvincent Lv 1 70 pts. 9,889
  6. Avatar for spmm 16. spmm Lv 1 68 pts. 9,889
  7. Avatar for NickyCGS 17. NickyCGS Lv 1 66 pts. 9,888
  8. Avatar for mimi 18. mimi Lv 1 65 pts. 9,882
  9. Avatar for grogar7 19. grogar7 Lv 1 63 pts. 9,875
  10. Avatar for auntdeen 20. auntdeen Lv 1 61 pts. 9,874

Comments


beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

Note that these secondary structure predictions are not necessarily present in the models that have been provided in the puzzle.