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946: CASP11 T0853: WeFold Round

Closed since over 11 years ago

Intermediate Intermediate Overall Overall Prediction Prediction CASP11 CASP11

Summary

Created
July 23, 2014
Expires
Max points
100
Description

For this 152 residue CASP11 Target, T0853, we are giving you 3 different server predictions selected by our WeFold collaborators. Resetting the puzzle will cycle through each model and they are available in the Alignment Tool so you can use partial threading between them. Secondary structure predictions are in the puzzle comments.

Top groups

  1. Avatar for DSN @ Home 21. DSN @ Home 1 pt. 9,017
  2. Avatar for CHEN 4801 22. CHEN 4801 1 pt. 6,488
  1. Avatar for NycteaSandiaca 101. NycteaSandiaca Lv 1 4 pts. 9,554
  2. Avatar for BootsMcGraw 102. BootsMcGraw Lv 1 3 pts. 9,551
  3. Avatar for bamh 103. bamh Lv 1 3 pts. 9,551
  4. Avatar for frostschutz 104. frostschutz Lv 1 3 pts. 9,546
  5. Avatar for caglar 105. caglar Lv 1 3 pts. 9,546
  6. Avatar for ManVsYard 106. ManVsYard Lv 1 3 pts. 9,538
  7. Avatar for GreekCivilization 107. GreekCivilization Lv 1 3 pts. 9,533
  8. Avatar for brgreening 108. brgreening Lv 1 3 pts. 9,530
  9. Avatar for frozenice9 109. frozenice9 Lv 1 3 pts. 9,528
  10. Avatar for clacker 110. clacker Lv 1 2 pts. 9,528

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

Note that these secondary structure predictions are not necessarily present in the models that have been provided in the puzzle.