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946: CASP11 T0853: WeFold Round

Closed since over 11 years ago

Intermediate Overall Prediction CASP11

Summary

Created
July 23, 2014
Expires
Max points
100
Description

For this 152 residue CASP11 Target, T0853, we are giving you 3 different server predictions selected by our WeFold collaborators. Resetting the puzzle will cycle through each model and they are available in the Alignment Tool so you can use partial threading between them. Secondary structure predictions are in the puzzle comments.

Top groups

  1. Avatar for DSN @ Home 21. DSN @ Home 1 pt. 9,017
  2. Avatar for CHEN 4801 22. CHEN 4801 1 pt. 6,488
  1. Avatar for biochemist93 121. biochemist93 Lv 1 2 pts. 9,457
  2. Avatar for Primalsoul 122. Primalsoul Lv 1 1 pt. 9,455
  3. Avatar for cnhrcolemam 123. cnhrcolemam Lv 1 1 pt. 9,435
  4. Avatar for jokke89B 124. jokke89B Lv 1 1 pt. 9,430
  5. Avatar for pizpot 125. pizpot Lv 1 1 pt. 9,428
  6. Avatar for frezae 126. frezae Lv 1 1 pt. 9,424
  7. Avatar for parsnip 127. parsnip Lv 1 1 pt. 9,421
  8. Avatar for Close At Hand 128. Close At Hand Lv 1 1 pt. 9,419
  9. Avatar for martinf 129. martinf Lv 1 1 pt. 9,415
  10. Avatar for Funkano 130. Funkano Lv 1 1 pt. 9,415

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

Note that these secondary structure predictions are not necessarily present in the models that have been provided in the puzzle.