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946: CASP11 T0853: WeFold Round

Closed since over 11 years ago

Intermediate Intermediate Overall Overall Prediction Prediction CASP11 CASP11

Summary

Created
July 23, 2014
Expires
Max points
100
Description

For this 152 residue CASP11 Target, T0853, we are giving you 3 different server predictions selected by our WeFold collaborators. Resetting the puzzle will cycle through each model and they are available in the Alignment Tool so you can use partial threading between them. Secondary structure predictions are in the puzzle comments.

Top groups

  1. Avatar for DSN @ Home 21. DSN @ Home 1 pt. 9,017
  2. Avatar for CHEN 4801 22. CHEN 4801 1 pt. 6,488
  1. Avatar for VigorousBog 141. VigorousBog Lv 1 1 pt. 9,379
  2. Avatar for fishercat 142. fishercat Lv 1 1 pt. 9,379
  3. Avatar for perrya 143. perrya Lv 1 1 pt. 9,379
  4. Avatar for Arne Heessels 144. Arne Heessels Lv 1 1 pt. 9,375
  5. Avatar for gstarnau 145. gstarnau Lv 1 1 pt. 9,369
  6. Avatar for alanrichard 146. alanrichard Lv 1 1 pt. 9,367
  7. Avatar for Jaco van As 147. Jaco van As Lv 1 1 pt. 9,362
  8. Avatar for persephone977 148. persephone977 Lv 1 1 pt. 9,352
  9. Avatar for mirjamvandelft 149. mirjamvandelft Lv 1 1 pt. 9,346
  10. Avatar for allie_heather47 150. allie_heather47 Lv 1 1 pt. 9,339

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

Note that these secondary structure predictions are not necessarily present in the models that have been provided in the puzzle.