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946: CASP11 T0853: WeFold Round

Closed since over 11 years ago

Intermediate Overall Prediction CASP11

Summary

Created
July 23, 2014
Expires
Max points
100
Description

For this 152 residue CASP11 Target, T0853, we are giving you 3 different server predictions selected by our WeFold collaborators. Resetting the puzzle will cycle through each model and they are available in the Alignment Tool so you can use partial threading between them. Secondary structure predictions are in the puzzle comments.

Top groups

  1. Avatar for DSN @ Home 21. DSN @ Home 1 pt. 9,017
  2. Avatar for CHEN 4801 22. CHEN 4801 1 pt. 6,488
  1. Avatar for aspadistra 181. aspadistra Lv 1 1 pt. 9,017
  2. Avatar for Tac1 182. Tac1 Lv 1 1 pt. 9,007
  3. Avatar for Pibeagles 183. Pibeagles Lv 1 1 pt. 8,883
  4. Avatar for cassandraberry81897 184. cassandraberry81897 Lv 1 1 pt. 8,868
  5. Avatar for may of rose 185. may of rose Lv 1 1 pt. 8,735
  6. Avatar for Simek 186. Simek Lv 1 1 pt. 8,707
  7. Avatar for adio8 187. adio8 Lv 1 1 pt. 8,707
  8. Avatar for karost 188. karost Lv 1 1 pt. 8,707
  9. Avatar for jeff101 189. jeff101 Lv 1 1 pt. 8,707
  10. Avatar for superbeta 190. superbeta Lv 1 1 pt. 8,553

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

Note that these secondary structure predictions are not necessarily present in the models that have been provided in the puzzle.