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946: CASP11 T0853: WeFold Round

Closed since over 11 years ago

Intermediate Overall Prediction CASP11

Summary

Created
July 23, 2014
Expires
Max points
100
Description

For this 152 residue CASP11 Target, T0853, we are giving you 3 different server predictions selected by our WeFold collaborators. Resetting the puzzle will cycle through each model and they are available in the Alignment Tool so you can use partial threading between them. Secondary structure predictions are in the puzzle comments.

Top groups

  1. Avatar for DSN @ Home 21. DSN @ Home 1 pt. 9,017
  2. Avatar for CHEN 4801 22. CHEN 4801 1 pt. 6,488
  1. Avatar for hpaege 31. hpaege Lv 1 45 pts. 9,804
  2. Avatar for johnmitch 32. johnmitch Lv 1 44 pts. 9,801
  3. Avatar for viosca 33. viosca Lv 1 42 pts. 9,800
  4. Avatar for Bletchley Park 34. Bletchley Park Lv 1 41 pts. 9,795
  5. Avatar for KarenCH 35. KarenCH Lv 1 40 pts. 9,792
  6. Avatar for Grom 36. Grom Lv 1 39 pts. 9,786
  7. Avatar for MurloW 37. MurloW Lv 1 38 pts. 9,783
  8. Avatar for crpainter 38. crpainter Lv 1 36 pts. 9,775
  9. Avatar for christioanchauvin 39. christioanchauvin Lv 1 35 pts. 9,767
  10. Avatar for bertro 40. bertro Lv 1 34 pts. 9,766

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

Note that these secondary structure predictions are not necessarily present in the models that have been provided in the puzzle.