Placeholder image of a protein
Icon representing a puzzle

946: CASP11 T0853: WeFold Round

Closed since over 11 years ago

Intermediate Intermediate Overall Overall Prediction Prediction CASP11 CASP11

Summary

Created
July 23, 2014
Expires
Max points
100
Description

For this 152 residue CASP11 Target, T0853, we are giving you 3 different server predictions selected by our WeFold collaborators. Resetting the puzzle will cycle through each model and they are available in the Alignment Tool so you can use partial threading between them. Secondary structure predictions are in the puzzle comments.

Top groups

  1. Avatar for DSN @ Home 21. DSN @ Home 1 pt. 9,017
  2. Avatar for CHEN 4801 22. CHEN 4801 1 pt. 6,488
  1. Avatar for Jim Fraser 41. Jim Fraser Lv 1 33 pts. 9,765
  2. Avatar for Lindata 42. Lindata Lv 1 32 pts. 9,756
  3. Avatar for greepski 43. greepski Lv 1 31 pts. 9,755
  4. Avatar for joremen 44. joremen Lv 1 30 pts. 9,750
  5. Avatar for dcrwheeler 45. dcrwheeler Lv 1 29 pts. 9,746
  6. Avatar for MaartenDesnouck 46. MaartenDesnouck Lv 1 28 pts. 9,745
  7. Avatar for Mike Cassidy 47. Mike Cassidy Lv 1 28 pts. 9,740
  8. Avatar for vuvuvu 48. vuvuvu Lv 1 27 pts. 9,737
  9. Avatar for uhuuhu 49. uhuuhu Lv 1 26 pts. 9,730
  10. Avatar for Sissue 50. Sissue Lv 1 25 pts. 9,724

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

Note that these secondary structure predictions are not necessarily present in the models that have been provided in the puzzle.