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948: CASP11 T0855: Final WeFold Round

Closed since over 11 years ago

Intermediate Overall Prediction CASP11

Summary

Created
July 24, 2014
Expires
Max points
100
Description

For our last WeFold CASP11 Target, 119 residue T0855, we are starting you off with 4 different server predictions selected by our WeFold collaborators. Resetting the puzzle will cycle between each aligned model and they are available in the Alignment Tool so you can use partial threading between them. Secondary structure predictions are in the puzzle comments.

Top groups

  1. Avatar for Deleted group 21. Deleted group pts. 9,008
  2. Avatar for DSN @ Home 22. DSN @ Home 1 pt. 8,903
  3. Avatar for incognito group 23. incognito group 1 pt. 241
  1. Avatar for KarenCH
    1. KarenCH Lv 1
    100 pts. 9,594
  2. Avatar for Susume 2. Susume Lv 1 98 pts. 9,579
  3. Avatar for LociOiling 3. LociOiling Lv 1 95 pts. 9,578
  4. Avatar for jeff101 4. jeff101 Lv 1 93 pts. 9,560
  5. Avatar for nicobul 5. nicobul Lv 1 90 pts. 9,558
  6. Avatar for Madde 6. Madde Lv 1 88 pts. 9,553
  7. Avatar for auntdeen 7. auntdeen Lv 1 86 pts. 9,541
  8. Avatar for spmm 8. spmm Lv 1 83 pts. 9,518
  9. Avatar for retiredmichael 9. retiredmichael Lv 1 81 pts. 9,511
  10. Avatar for mirp 10. mirp Lv 1 79 pts. 9,485

Comments

fezmania Staff Lv 1

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

Note that these secondary structure predictions are not necessarily present in the models that have been provided in the puzzle.