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949: CASP11 Target Ts818: Sparse Data Contacts

Closed since over 11 years ago

Intermediate Overall Prediction CASP11 Predicted Contacts

Summary

Created
July 26, 2014
Expires
Max points
100
Description

For this target, the CASP11 organizers have provided "sparse" experimental data about possible contacts in the protein. Contacts are scored with the Contact Map filter in this puzzle, and there is an upper limit of 2250 possible points from the filter. The starting structure is an extended chain, and secondary structure predictions can be found below in the puzzle comments.

Top groups

  1. Avatar for FoldIt@Netherlands 11. FoldIt@Netherlands 5 pts. 10,527
  2. Avatar for Italiani Al Lavoro 12. Italiani Al Lavoro 4 pts. 10,401
  3. Avatar for Piratenpartei Deutschland 13. Piratenpartei Deutschland 2 pts. 10,281
  4. Avatar for HMT heritage 14. HMT heritage 2 pts. 10,144
  5. Avatar for Ukraine 15. Ukraine 1 pt. 9,837
  6. Avatar for Repro-men 16. Repro-men 1 pt. 9,436
  7. Avatar for Russian team 17. Russian team 1 pt. 9,285
  8. Avatar for Deleted group 18. Deleted group pts. 9,118
  9. Avatar for Natural Abilities 19. Natural Abilities 1 pt. 9,018
  10. Avatar for Team Schleswig-Holstein 20. Team Schleswig-Holstein 1 pt. 7,441
  1. Avatar for JUMELLE54 141. JUMELLE54 Lv 1 1 pt. 7,451
  2. Avatar for MuckeMcFly 142. MuckeMcFly Lv 1 1 pt. 7,441
  3. Avatar for perrystaff 143. perrystaff Lv 1 1 pt. 7,396
  4. Avatar for bradyrocket 144. bradyrocket Lv 1 1 pt. 7,324
  5. Avatar for galactobourico 145. galactobourico Lv 1 1 pt. 7,260
  6. Avatar for brgreening 146. brgreening Lv 1 1 pt. 7,245
  7. Avatar for frezae 147. frezae Lv 1 1 pt. 7,157
  8. Avatar for cobaltteal 148. cobaltteal Lv 1 1 pt. 7,120
  9. Avatar for JeNNeR 149. JeNNeR Lv 1 1 pt. 7,113
  10. Avatar for Thooliv 150. Thooliv Lv 1 1 pt. 6,973

Comments

bkoep Staff Lv 1

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.