Placeholder image of a protein
Icon representing a puzzle

949: CASP11 Target Ts818: Sparse Data Contacts

Closed since over 11 years ago

Intermediate Overall Prediction CASP11 Predicted Contacts

Summary

Created
July 26, 2014
Expires
Max points
100
Description

For this target, the CASP11 organizers have provided "sparse" experimental data about possible contacts in the protein. Contacts are scored with the Contact Map filter in this puzzle, and there is an upper limit of 2250 possible points from the filter. The starting structure is an extended chain, and secondary structure predictions can be found below in the puzzle comments.

Top groups

  1. Avatar for FoldIt@Netherlands 11. FoldIt@Netherlands 5 pts. 10,527
  2. Avatar for Italiani Al Lavoro 12. Italiani Al Lavoro 4 pts. 10,401
  3. Avatar for Piratenpartei Deutschland 13. Piratenpartei Deutschland 2 pts. 10,281
  4. Avatar for HMT heritage 14. HMT heritage 2 pts. 10,144
  5. Avatar for Ukraine 15. Ukraine 1 pt. 9,837
  6. Avatar for Repro-men 16. Repro-men 1 pt. 9,436
  7. Avatar for Russian team 17. Russian team 1 pt. 9,285
  8. Avatar for Deleted group 18. Deleted group pts. 9,118
  9. Avatar for Natural Abilities 19. Natural Abilities 1 pt. 9,018
  10. Avatar for Team Schleswig-Holstein 20. Team Schleswig-Holstein 1 pt. 7,441
  1. Avatar for may of rose 171. may of rose Lv 1 1 pt. 4,911
  2. Avatar for whiskeyindiatangotango 172. whiskeyindiatangotango Lv 1 1 pt. 4,897
  3. Avatar for jemiyajj 173. jemiyajj Lv 1 1 pt. 4,695
  4. Avatar for davsmi9 174. davsmi9 Lv 1 1 pt. 4,598
  5. Avatar for zhuizhu 175. zhuizhu Lv 1 1 pt. 4,174
  6. Avatar for auntdeen 176. auntdeen Lv 1 1 pt. 4,095
  7. Avatar for perrya 177. perrya Lv 1 1 pt. 4,026
  8. Avatar for multaq 178. multaq Lv 1 1 pt. 3,594
  9. Avatar for Jetjet 179. Jetjet Lv 1 1 pt. 3,356
  10. Avatar for ManVsYard 180. ManVsYard Lv 1 1 pt. 2,988

Comments

bkoep Staff Lv 1

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.