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949: CASP11 Target Ts818: Sparse Data Contacts

Closed since over 11 years ago

Intermediate Overall Prediction CASP11 Predicted Contacts

Summary

Created
July 26, 2014
Expires
Max points
100
Description

For this target, the CASP11 organizers have provided "sparse" experimental data about possible contacts in the protein. Contacts are scored with the Contact Map filter in this puzzle, and there is an upper limit of 2250 possible points from the filter. The starting structure is an extended chain, and secondary structure predictions can be found below in the puzzle comments.

Top groups

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  3. Avatar for Piratenpartei Deutschland 13. Piratenpartei Deutschland 2 pts. 10,281
  4. Avatar for HMT heritage 14. HMT heritage 2 pts. 10,144
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  6. Avatar for Repro-men 16. Repro-men 1 pt. 9,436
  7. Avatar for Russian team 17. Russian team 1 pt. 9,285
  8. Avatar for Deleted group 18. Deleted group pts. 9,118
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  2. Avatar for Darthvader_007 182. Darthvader_007 Lv 1 1 pt. 0
  3. Avatar for cassandraberry81897 183. cassandraberry81897 Lv 1 1 pt. 0
  4. Avatar for Dantoto 184. Dantoto Lv 1 1 pt. 0
  5. Avatar for phi16 185. phi16 Lv 1 1 pt. 0
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Comments

bkoep Staff Lv 1

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.