Placeholder image of a protein
Icon representing a puzzle

949: CASP11 Target Ts818: Sparse Data Contacts

Closed since over 11 years ago

Intermediate Overall Prediction CASP11 Predicted Contacts

Summary

Created
July 26, 2014
Expires
Max points
100
Description

For this target, the CASP11 organizers have provided "sparse" experimental data about possible contacts in the protein. Contacts are scored with the Contact Map filter in this puzzle, and there is an upper limit of 2250 possible points from the filter. The starting structure is an extended chain, and secondary structure predictions can be found below in the puzzle comments.

Top groups

  1. Avatar for foldeRNA 21. foldeRNA 1 pt. 7,113
  2. Avatar for DSN @ Home 22. DSN @ Home 1 pt. 6,164
  3. Avatar for Deleted group 23. Deleted group pts. 957
  1. Avatar for SamuelJackson 191. SamuelJackson Lv 1 1 pt. 0
  2. Avatar for puxatudo 192. puxatudo Lv 1 1 pt. 0
  3. Avatar for pizpot 193. pizpot Lv 1 1 pt. 0
  4. Avatar for froggs554 194. froggs554 Lv 1 1 pt. 0
  5. Avatar for heyubob2 195. heyubob2 Lv 1 1 pt. 0
  6. Avatar for packer 196. packer Lv 1 1 pt. 0
  7. Avatar for histon 197. histon Lv 1 1 pt. 0
  8. Avatar for farhana 198. farhana Lv 1 1 pt. 0
  9. Avatar for drising 199. drising Lv 1 1 pt. 0
  10. Avatar for greepski 200. greepski Lv 1 1 pt. 0

Comments

bkoep Staff Lv 1

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.