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Beginner Puzzle (<150): Docking Design

Closed since over 11 years ago

Beginner Beginner

Summary

Created
January 27, 2014
Expires
Max points
100
Description

We are giving you a helix positioned over a hydrophobic groove where binding occurs in nature. You can mutate any residue on the helix but none on the native binding region. Try to look for favorable hydrophobic interactions in this groove while maintaining the helix. For players with fewer than 150 global points.



START HERE:

If you are new to Foldit, here are detailed instructions to get you started:

http://fold.it/portal/node/988864

_____________________________


If you want to fold proteins, know that there are many ways to play and this variety is the main value of Foldit :

- try all puzzles not only "Beginners" ones,

- fold first the ones you like the most,

- try it by yourself to understand what works and what doesn't,

- ask for tips in global chat when you think you don't understand something.


Make sure you have followed these tutorials:

- Lonely Sheets,

- Lock and Lower,

- Rebuild,

- Structure and Rebuild,

- Movin' Along,

- Control over Clashing,

- Intro to Design,

- Swappin' Sidechains,

- Mass Mutate,

- Insertion and Deletion


before starting this puzzle.

Top groups

  1. Avatar for FoldingCondors 31. FoldingCondors 1 pt. 8,424
  2. Avatar for Window Group 32. Window Group 1 pt. 8,239
  3. Avatar for Deleted group 33. Deleted group pts. 7,985
  4. Avatar for CHEN 4801 34. CHEN 4801 1 pt. 7,530
  5. Avatar for SETIKAH@KOREA 35. SETIKAH@KOREA 1 pt. 7,530
  1. Avatar for rshulman78 511. rshulman78 Lv 1 7 pts. 8,978
  2. Avatar for Eternal4 512. Eternal4 Lv 1 7 pts. 8,978
  3. Avatar for hyarokumo 513. hyarokumo Lv 1 7 pts. 8,976
  4. Avatar for Deleted player 514. Deleted player pts. 8,976
  5. Avatar for kmgrogg2016 515. kmgrogg2016 Lv 1 7 pts. 8,976
  6. Avatar for dimethyltryptamine 516. dimethyltryptamine Lv 1 7 pts. 8,974
  7. Avatar for saharsawani 517. saharsawani Lv 1 7 pts. 8,973
  8. Avatar for dan61rusty 518. dan61rusty Lv 1 7 pts. 8,973
  9. Avatar for pobe 519. pobe Lv 1 7 pts. 8,970
  10. Avatar for kls5805 520. kls5805 Lv 1 7 pts. 8,970

Comments

rjsthethird Lv 1

Is it just me or did the scoring on this change when the program was last updated? I had a score of 9148 saved, but when I opened it the score came in at 8818.

upquark1 Lv 1

Same here. My score was 9,196 a couple days ago. Now I can't get back for the life of me. My best is now 8,928.7

jstoddard Lv 1

Does the fragment have to be a helix? The instructions suggested that any amino acid could be mutated on the helix. I didn't think to try explore alternate loops until a couple days ago.