Repeatedly and consistently, ligand puzzles will crash my pc after a while. This has been happening for several MS Windows client revisions (A long standing issue thus). There seems to be a pattern to this crash.
Issue happens on multiple PCs. Error log shows no peculiarities and is abruptly cut off.
Here is a debug.txt, there was nothing in particular in the log.txt.
{
"backtrace" : " 1: no symbol (no line)\n 2: interactive::gui::EventHandler::~EventHandler +381 bytes (no line)\n 3: interactive::geom::Sphere::`scalar deleting destructor' +184 bytes (no line)\n 4: std::vector<interactive::util::owning_ptr<interactive::geom::Renderable>,std::allocator<interactive::util::owning_ptr<interactive::geom::Renderable> > >::clear +68 bytes (no line)\n 5: interactive::geom::Viewport::select_renderable +155 bytes (no line)\n 6: interactive::geom::Viewport::get_handler_at_point +127 bytes (no line)\n 7: interactive::gui::Container::get_handler_at_point +116 bytes (no line)\n 8: interactive::gui::TopLevel::get_handler_at_point +50 bytes (no line)\n 9: interactive::gui::TopLevel::update_cast_based_handlers +153 bytes (no line)\n 10: interactive::gui::TopLevel::update +2417 bytes (no line)\n 11: interactive::gui::GUISystem::update +183 bytes (no line)\n 12: interactive::guiwrapper::GUIWrapper::tick_frame +123 bytes (no line)\n 13: interactive::guiwrapper::win32::Win32Wrapper::start +452 bytes (no line)\n 14: interactive::application::interactive_main +3254 bytes (no line)\n 15: game::application::game_main +2218 bytes (no line)\n 16: no symbol (no line)\n 17: no symbol (no line)\n 18: no symbol (no line)\n 19: BaseThreadInitThunk +13 bytes (no line)\n 20: RtlUserThreadStart +33 bytes (no line)\n",
"build_id" : "20230512-8ec99fe478-win_x64-devprev",
"crash_id" : "1bb1a59d-db0b-4ed4-8106-360066b5b539",
"crash_time" : 1692690882,
"current_actions" : "RecipeRunnerAction,ActionDualSpaceGlobalMinimize",
"current_tool" : "Selection Interface",
"file" : "Unknown File:0",
"machine_id" : "a4306633-139d-4d46-85b6-bf2ab1bf9b11",
"message" : "Unknown Exception",
"puzzle_id" : 2013684,
"puzzle_running_time" : 3014,
"recipe_id" : 1,
"release_id" : 25,
"running_time" : 62545.271886349845,
"user_id" : 108474
}
Here is a debug.txt for you:
{
"backtrace" : " 1: utility::graph::Node::drop_edge +71 bytes (no line)\n 2: utility::graph::Edge::~Edge +75 bytes (no line)\n 3: core::scoring::EnergyEdge::`scalar deleting destructor' +70 bytes (no line)\n 4: core::scoring::EnergyGraph::delete_edge +27 bytes (no line)\n 5: utility::graph::Graph::drop_all_edges +91 bytes (no line)\n 6: core::scoring::Energies::clear_energies +250 bytes (no line)\n 7: core::scoring::Energies::clear +18 bytes (no line)\n 8: core::pose::Pose::~Pose +89 bytes (no line)\n 9: core::pose::Pose::`scalar deleting destructor' +20 bytes (no line)\n 10: interactive::application::appposeview::HydrophobicComposite::recompute_from_thread +1751 bytes (no line)\n 11: interactive::application::appposeview::HydrophobicComposite::HydroThread::operator() +602 bytes (no line)\n 12: interactive::util::Thread::thread_entry_func +45 bytes (no line)\n 13: interactive::util::Thread::win32_thread_startup_helper +17 bytes (no line)\n 14: BaseThreadInitThunk +13 bytes (no line)\n 15: RtlUserThreadStart +33 bytes (no line)\n",
"build_id" : "20230512-8ec99fe478-win_x64-devprev",
"crash_id" : "9b9f7763-e2b6-40ab-b11c-784033840549",
"crash_time" : 1693924374,
"current_actions" : "ToolBridgeAction,ActionDualSpaceMinimize",
"current_tool" : "Selection Interface",
"file" : "Unknown File:0",
"machine_id" : "a4306633-139d-4d46-85b6-bf2ab1bf9b11",
"message" : "Unknown Exception",
"puzzle_id" : 2013686,
"puzzle_running_time" : 99013,
"recipe_id" : 103333,
"release_id" : 25,
"running_time" : 113106.05821177477,
"user_id" : 108474
}
@jflat06 @rmoretti
@jflat06 @rmoretti And here is the corresponding log.txt ending:
interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLigandMMFF
standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionDualSpaceMinimize
standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionDualSpaceMinimize
standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionDualSpaceMinimize
standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionDualSpaceMinimize
interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionDualSpaceMinimize
interactive.application.shared.tool_util: {0} RT: 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
game.application.server.CurlFetcher: {0} https://fold.it/api/get_compound_library
game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzles
standalone.application.boinc.Puzzle: {0} .ocmdline d0c38b589470b99976db250c17c71d3d
standalone.application.boinc.Puzzle: {0} .ofilters eb8c2fc8a467c4cf237618a29c45f665
standalone.application.boinc.Puzzle: {0} .opdb a7916996dc6adb777c51f4c4a575fa84
standalone.application.boinc.Puzzle: {0} .opuzzle_setup eddf1be56eb7d97f3a0ce625e923bff7
standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f
standalone.application.boinc.Puzzle: {0} .ocmdline 9213d67f559515a2b1c07bd45bdb7cf9
standalone.application.boinc.Puzzle: {0} .ocnstr adee7993ef58481848b77be273ca0301
standalone.application.boinc.Puzzle: {0} .ofilters 7ac1df082f19ea354c52ff327c3f8072
standalone.application.boinc.Puzzle: {0} .opdb 16436660143808fe77ad2b2d3c6db17b
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 63dc36329331e9ebb264d652e4aa7668
standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f
standalone.application.boinc.Puzzle: {0} .opdb 2cb8ff8457d30a4bf7f2ba9e4df53760
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 9090234d1eabcc31aeb31cc118fa57e2
standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f
standalone.application.boinc.Puzzle: {0} .ofilters ff9601d2e742b33414f769eee8e85380
standalone.application.boinc.Puzzle: {0} .opdb 12911ed5a6b45f15c454ed4120a354fb
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 08586216d9939ed1b557037a98b94cc2
standalone.application.boinc.Puzzle: {0} .owts 5b16284e5e5e4f85b6793eba788a0ce0
standalone.application.boinc.Puzzle: {0} .opdb cd7ce34bddf6ff589dd3c2980eb4dbc3
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 43150cd6f2eb45e569efa1bfe4d34f75
standalone.application.boinc.Puzzle: {0} .owts 176403f366c9d25492c31b94f83a88c2
standalone.application.boinc.Puzzle: {0} .sf db3e57ac6e1baf75c3e9488e44dc0c27
standalone.application.boinc.Puzzle: {0} .ofilters 4500e3b35f1d867f44af328bb8d92cf8
standalone.application.boinc.Puzzle: {0} .opdb 38df0a198104fe48d0bec70e7dd935e0
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 0f2652dfea5d4d62f85fe01bc23800ef
standalone.application.boinc.Puzzle: {0} .osmiles_sim_filter bb4d599c17b23f800d77e536b55c8bdc
standalone.application.boinc.Puzzle: {0} .owts e67a43609f0d4640548a0b6ce55cf7ba
standalone.application.boinc.Puzzle: {0} .params de1d51f7731bd1212cbbe6532ae24a0b
standalone.application.boinc.Puzzle: {0} .odensity f140b48a0d3ba3b1a5b52654b2c5436a
standalone.application.boinc.Puzzle: {0} .opdb 240e34586cce23f4ed169c822e860577
standalone.application.boinc.Puzzle: {0} .opuzzle_setup beba35efb5c3dc08b28f827c509250d8
standalone.application.boinc.Puzzle: {0} .owts 176403f366c9d25492c31b94f83a88c2
game.application.server.CurlFetcher: {0} https://fold.it/api/post_score
game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores
game.application.server.CurlFetcher: {0} https://fold.it/api/post_solution
game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzles
standalone.application.boinc.Puzzle: {0} .ocmdline d0c38b589470b99976db250c17c71d3d
standalone.application.boinc.Puzzle: {0} .ofilters eb8c2fc8a467c4cf237618a29c45f665
standalone.application.boinc.Puzzle: {0} .opdb a7916996dc6adb777c51f4c4a575fa84
standalone.application.boinc.Puzzle: {0} .opuzzle_setup eddf1be56eb7d97f3a0ce625e923bff7
standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f
standalone.application.boinc.Puzzle: {0} .ocmdline 9213d67f559515a2b1c07bd45bdb7cf9
standalone.application.boinc.Puzzle: {0} .ocnstr adee7993ef58481848b77be273ca0301
standalone.application.boinc.Puzzle: {0} .ofilters 7ac1df082f19ea354c52ff327c3f8072
standalone.application.boinc.Puzzle: {0} .opdb 16436660143808fe77ad2b2d3c6db17b
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 63dc36329331e9ebb264d652e4aa7668
standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f
standalone.application.boinc.Puzzle: {0} .opdb 2cb8ff8457d30a4bf7f2ba9e4df53760
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 9090234d1eabcc31aeb31cc118fa57e2
standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f
standalone.application.boinc.Puzzle: {0} .ofilters ff9601d2e742b33414f769eee8e85380
standalone.application.boinc.Puzzle: {0} .opdb 12911ed5a6b45f15c454ed4120a354fb
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 08586216d9939ed1b557037a98b94cc2
standalone.application.boinc.Puzzle: {0} .owts 5b16284e5e5e4f85b6793eba788a0ce0
standalone.application.boinc.Puzzle: {0} .opdb cd7ce34bddf6ff589dd3c2980eb4dbc3
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 43150cd6f2eb45e569efa1bfe4d34f75
standalone.application.boinc.Puzzle: {0} .owts 176403f366c9d25492c31b94f83a88c2
standalone.application.boinc.Puzzle: {0} .sf db3e57ac6e1baf75c3e9488e44dc0c27
standalone.application.boinc.Puzzle: {0} .ofilters 4500e3b35f1d867f44af328bb8d92cf8
standalone.application.boinc.Puzzle: {0} .opdb 38df0a198104fe48d0bec70e7dd935e0
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 0f2652dfea5d4d62f85fe01bc23800ef
standalone.application.boinc.Puzzle: {0} .osmiles_sim_filter bb4d599c17b23f800d77e536b55c8bdc
standalone.application.boinc.Puzzle: {0} .owts e67a43609f0d4640548a0b6ce55cf7ba
standalone.application.boinc.Puzzle: {0} .params de1d51f7731bd1212cbbe6532ae24a0b
standalone.application.boinc.Puzzle: {0} .odensity f140b48a0d3ba3b1a5b52654b2c5436a
standalone.application.boinc.Puzzle: {0} .opdb 240e34586cce23f4ed169c822e860577
standalone.application.boinc.Puzzle: {0} .opuzzle_setup beba35efb5c3dc08b28f827c509250d8
standalone.application.boinc.Puzzle: {0} .owts 176403f366c9d25492c31b94f83a88c2
game.application.server.CurlFetcher: {0} https://fold.it/api/post_score
game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores
game.application.server.CurlFetcher: {0} https://fold.it/api/post_solution
game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzles
standalone.application.boinc.Puzzle: {0} .ocmdline d0c38b589470b99976db250c17c71d3d
standalone.application.boinc.Puzzle: {0} .ofilters eb8c2fc8a467c4cf237618a29c45f665
standalone.application.boinc.Puzzle: {0} .opdb a7916996dc6adb777c51f4c4a575fa84
standalone.application.boinc.Puzzle: {0} .opuzzle_setup eddf1be56eb7d97f3a0ce625e923bff7
standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f
standalone.application.boinc.Puzzle: {0} .ocmdline 9213d67f559515a2b1c07bd45bdb7cf9
standalone.application.boinc.Puzzle: {0} .ocnstr adee7993ef58481848b77be273ca0301
standalone.application.boinc.Puzzle: {0} .ofilters 7ac1df082f19ea354c52ff327c3f8072
standalone.application.boinc.Puzzle: {0} .opdb 16436660143808fe77ad2b2d3c6db17b
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 63dc36329331e9ebb264d652e4aa7668
standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f
standalone.application.boinc.Puzzle: {0} .opdb 2cb8ff8457d30a4bf7f2ba9e4df53760
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 9090234d1eabcc31aeb31cc118fa57e2
standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f
standalone.application.boinc.Puzzle: {0} .ofilters ff9601d2e742b33414f769eee8e85380
standalone.application.boinc.Puzzle: {0} .opdb 12911ed5a6b45f15c454ed4120a354fb
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 08586216d9939ed1b557037a98b94cc2
standalone.application.boinc.Puzzle: {0} .owts 5b16284e5e5e4f85b6793eba788a0ce0
standalone.application.boinc.Puzzle: {0} .opdb cd7ce34bddf6ff589dd3c2980eb4dbc3
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 43150cd6f2eb45e569efa1bfe4d34f75
standalone.application.boinc.Puzzle: {0} .owts 176403f366c9d25492c31b94f83a88c2
standalone.application.boinc.Puzzle: {0} .sf db3e57ac6e1baf75c3e9488e44dc0c27
standalone.application.boinc.Puzzle: {0} .ofilters 4500e3b35f1d867f44af328bb8d92cf8
standalone.application.boinc.Puzzle: {0} .opdb 38df0a198104fe48d0bec70e7dd935e0
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 0f2652dfea5d4d62f85fe01bc23800ef
standalone.application.boinc.Puzzle: {0} .osmiles_sim_filter bb4d599c17b23f800d77e536b55c8bdc
standalone.application.boinc.Puzzle: {0} .owts e67a43609f0d4640548a0b6ce55cf7ba
standalone.application.boinc.Puzzle: {0} .params de1d51f7731bd1212cbbe6532ae24a0b
standalone.application.boinc.Puzzle: {0} .odensity f140b48a0d3ba3b1a5b52654b2c5436a
standalone.application.boinc.Puzzle: {0} .opdb 240e34586cce23f4ed169c822e860577
standalone.application.boinc.Puzzle: {0} .opuzzle_setup beba35efb5c3dc08b28f827c509250d8
standalone.application.boinc.Puzzle: {0} .owts 176403f366c9d25492c31b94f83a88c2
game.application.server.CurlFetcher: {0} https://fold.it/api/post_score
game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores
game.application.server.CurlFetcher: {0} https://fold.it/api/post_solution
game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzles
standalone.application.boinc.Puzzle: {0} .ocmdline d0c38b589470b99976db250c17c71d3d
standalone.application.boinc.Puzzle: {0} .ofilters eb8c2fc8a467c4cf237618a29c45f665
standalone.application.boinc.Puzzle: {0} .opdb a7916996dc6adb777c51f4c4a575fa84
standalone.application.boinc.Puzzle: {0} .opuzzle_setup eddf1be56eb7d97f3a0ce625e923bff7
standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f
standalone.application.boinc.Puzzle: {0} .ocmdline 9213d67f559515a2b1c07bd45bdb7cf9
standalone.application.boinc.Puzzle: {0} .ocnstr adee7993ef58481848b77be273ca0301
standalone.application.boinc.Puzzle: {0} .ofilters 7ac1df082f19ea354c52ff327c3f8072
standalone.application.boinc.Puzzle: {0} .opdb 16436660143808fe77ad2b2d3c6db17b
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 63dc36329331e9ebb264d652e4aa7668
standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f
standalone.application.boinc.Puzzle: {0} .opdb 2cb8ff8457d30a4bf7f2ba9e4df53760
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 9090234d1eabcc31aeb31cc118fa57e2
standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f
standalone.application.boinc.Puzzle: {0} .ofilters ff9601d2e742b33414f769eee8e85380
standalone.application.boinc.Puzzle: {0} .opdb 12911ed5a6b45f15c454ed4120a354fb
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 08586216d9939ed1b557037a98b94cc2
standalone.application.boinc.Puzzle: {0} .owts 5b16284e5e5e4f85b6793eba788a0ce0
standalone.application.boinc.Puzzle: {0} .opdb cd7ce34bddf6ff589dd3c2980eb4dbc3
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 43150cd6f2eb45e569efa1bfe4d34f75
standalone.application.boinc.Puzzle: {0} .owts 176403f366c9d25492c31b94f83a88c2
standalone.application.boinc.Puzzle: {0} .sf db3e57ac6e1baf75c3e9488e44dc0c27
standalone.application.boinc.Puzzle: {0} .ofilters 4500e3b35f1d867f44af328bb8d92cf8
standalone.application.boinc.Puzzle: {0} .opdb 38df0a198104fe48d0bec70e7dd935e0
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 0f2652dfea5d4d62f85fe01bc23800ef
standalone.application.boinc.Puzzle: {0} .osmiles_sim_filter bb4d599c17b23f800d77e536b55c8bdc
standalone.application.boinc.Puzzle: {0} .owts e67a43609f0d4640548a0b6ce55cf7ba
standalone.application.boinc.Puzzle: {0} .params de1d51f7731bd1212cbbe6532ae24a0b
standalone.application.boinc.Puzzle: {0} .odensity f140b48a0d3ba3b1a5b52654b2c5436a
standalone.application.boinc.Puzzle: {0} .opdb 240e34586cce23f4ed169c822e860577
standalone.application.boinc.Puzzle: {0} .opuzzle_setup beba35efb5c3dc08b28f827c509250d8
standalone.application.boinc.Puzzle: {0} .owts 176403f366c9d25492c31b94f83a88c2
game.application.server.CurlFetcher: {0} https://fold.it/api/post_score
game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores
game.application.server.CurlFetcher: {0} https://fold.it/api/post_solution
UNHANDLED EXCEPTION
****** Encountered Crash at Unknown File:0
Unknown Exception
1: utility::graph::Node::drop_edge +71 bytes (no line)
2: utility::graph::Edge::~Edge +75 bytes (no line)
3: core::scoring::EnergyEdge::`scalar deleting destructor' +70 bytes (no line)
4: core::scoring::EnergyGraph::delete_edge +27 bytes (no line)
5: utility::graph::Graph::drop_all_edges +91 bytes (no line)
6: core::scoring::Energies::clear_energies +250 bytes (no line)
7: core::scoring::Energies::clear +18 bytes (no line)
8: core::pose::Pose::~Pose +89 bytes (no line)
9: core::pose::Pose::`scalar deleting destructor' +20 bytes (no line)
10: interactive::application::appposeview::HydrophobicComposite::recompute_from_thread +1751 bytes (no line)
11: interactive::application::appposeview::HydrophobicComposite::HydroThread::operator() +602 bytes (no line)
12: interactive::util::Thread::thread_entry_func +45 bytes (no line)
13: interactive::util::Thread::win32_thread_startup_helper +17 bytes (no line)
14: BaseThreadInitThunk +13 bytes (no line)
15: RtlUserThreadStart +33 bytes (no line)
1: utility::graph::Node::drop_edge +71 bytes (no line)
2: utility::graph::Edge::~Edge +75 bytes (no line)
3: core::scoring::EnergyEdge::`scalar deleting destructor' +70 bytes (no line)
4: core::scoring::EnergyGraph::delete_edge +27 bytes (no line)
5: utility::graph::Graph::drop_all_edges +91 bytes (no line)
6: core::scoring::Energies::clear_energies +250 bytes (no line)
7: core::scoring::Energies::clear +18 bytes (no line)
8: core::pose::Pose::~Pose +89 bytes (no line)
9: core::pose::Pose::`scalar deleting destructor' +20 bytes (no line)
10: interactive::application::appposeview::HydrophobicComposite::recompute_from_thread +1751 bytes (no line)
11: interactive::application::appposeview::HydrophobicComposite::HydroThread::operator() +602 bytes (no line)
12: interactive::util::Thread::thread_entry_func +45 bytes (no line)
13: interactive::util::Thread::win32_thread_startup_helper +17 bytes (no line)
14: BaseThreadInitThunk +13 bytes (no line)
15: RtlUserThreadStart +33 bytes (no line)
And another reboot, most prominent error: no object matching key 0.
I would appreciate at least an acknowledgement that these bug reports are being noticed.
Just found out that, so elegantly, my current top scoring sequence is stored in the log.txt.
So you'll have to take my word for it that this error is listed hundreds of times in a row.
game.application.server.CurlFetcher: {0} https://fold.it/api/get_compound_library
interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionDualSpaceMinimize
game.application.LoadSaveDialog: {0} No object matching key 0.
game.application.LoadSaveDialog: {0} No object matching key 0.
game.application.LoadSaveDialog: {0} No object matching key 0.
game.application.LoadSaveDialog: {0} No object matching key 0.
(etc etc)
Then it says:
core.chemical.ResidueTypeSet: {0} [ WARNING ] ResidueType LG_50018 of mode fa_standard is being added to a ResidueTypeSet of mode centroid
interactive.application.actions.ligand_util: {0} replacing residue
Then it says:
standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionLigandMMFF
standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionLigandMMFF
standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionLigandMMFF
standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionLigandMMFF
interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLigandMMFF
interactive.application.shared.tool_util: {0} RT: 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
[07:25:55] Molecule does not have explicit Hs. Consider calling AddHs()
[07:25:57] Molecule does not have explicit Hs. Consider calling AddHs()
game.application.server.CurlFetcher: {0} https://fold.it/api/get_compound_library
interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLigandMMFF
I would appreciate at least an acknowledgement that these bug reports are being noticed.
Yes, we're aware of the bug reports and are taking them onboard. We've unfortunately been a bit stretched for developer time recently, so we haven't spent as much time trying to track down the issues as we might like. But posting them here helps us to keep track of what still needs to be done.
I will note that I don't think the "No object matching key 0" is directly related to the crash you experienced. If you can get the debug.txt (or the backtrace at the very end of the log.txt), that tends to help better direct developer effort to the primary cause of the crash.
Thank you for acknowledging them. I'll keep gathering info and post here.
