Placeholder image of a protein
Icon representing a puzzle

1546: Extra Large Monomer Design

Closed since over 7 years ago

Intermediate Overall Design

Summary

Created
July 09, 2018
Expires
Max points
100
Description

This puzzle challenges players to design a single-chain protein with 95-120 residues. The starting structure has 95 residues, but more can be added at a cost of 32 points per residue. See the puzzle comments for filter details. The Baker Lab will run folding predictions on your solutions for this puzzle, and those that perform well will be synthesized in the lab. Remember, you can use the Upload for Scientists button for up to 5 designs that you want us to look at, even if they are not the best-scoring solutions!

Top groups

  1. Avatar for Team South Africa 11. Team South Africa 1 pt. 10,274
  2. Avatar for Window Group 12. Window Group 1 pt. 4,222
  3. Avatar for Italiani Al Lavoro 13. Italiani Al Lavoro 1 pt. 2,053
  4. Avatar for test_group1 14. test_group1 1 pt. 952
  5. Avatar for Minions of TWIS 15. Minions of TWIS 1 pt. 0
  1. Avatar for actiasluna
    1. actiasluna Lv 1
    100 pts. 12,593
  2. Avatar for matosfran 2. matosfran Lv 1 96 pts. 12,394
  3. Avatar for LociOiling 3. LociOiling Lv 1 91 pts. 12,387
  4. Avatar for bertro 4. bertro Lv 1 87 pts. 12,382
  5. Avatar for retiredmichael 5. retiredmichael Lv 1 83 pts. 12,376
  6. Avatar for Galaxie 6. Galaxie Lv 1 79 pts. 12,346
  7. Avatar for Deleted player 7. Deleted player pts. 12,259
  8. Avatar for Skippysk8s 8. Skippysk8s Lv 1 72 pts. 12,140
  9. Avatar for Glen B 9. Glen B Lv 1 68 pts. 12,119
  10. Avatar for dcrwheeler 10. dcrwheeler Lv 1 65 pts. 12,118

Comments

bkoep Staff Lv 1

Residue IE Score: Monitors that all PHE, TYR, and TRP residues are scoring well.

SS Design: Penalizes all CYS residues. Penalizes GLY, ALA residues in sheets. Penalizes GLY, ALA, SER, THR in helices.

Residue Count: Penalizes extra residues inserted beyond the starting 95, at a cost of 32 points per residue. Players may use up to 120 residues in total.