Placeholder image of a protein
Icon representing a puzzle

1598: Cryo-EM Freestyle with Density

Closed since over 7 years ago

Overall Prediction Electron Density

Summary


Created
November 12, 2018
Expires
Max points
100
Description

This protein is another part of the same protein complex with multiple subunits from Puzzle 1554 and Puzzle 1588, which has been the target of cryo-EM experiments. We are giving you an extended chain to start with, so good luck!

Top groups


  1. Avatar for Anthropic Dreams 100 pts. 18,575
  2. Avatar for Beta Folders 2. Beta Folders 76 pts. 18,531
  3. Avatar for Go Science 3. Go Science 56 pts. 18,377
  4. Avatar for Marvin's bunch 4. Marvin's bunch 41 pts. 18,306
  5. Avatar for Gargleblasters 5. Gargleblasters 29 pts. 15,926
  6. Avatar for Void Crushers 6. Void Crushers 20 pts. 14,746
  7. Avatar for Contenders 7. Contenders 14 pts. 13,372
  8. Avatar for L'Alliance Francophone 8. L'Alliance Francophone 9 pts. 12,343
  9. Avatar for Russian team 9. Russian team 6 pts. 12,185
  10. Avatar for Deleted group 10. Deleted group pts. 11,046

  1. Avatar for Ravenpaw 141. Ravenpaw Lv 1 1 pt. 0
  2. Avatar for gdnskye 142. gdnskye Lv 1 1 pt. 0
  3. Avatar for graficon 143. graficon Lv 1 1 pt. 0
  4. Avatar for lucyfrose 144. lucyfrose Lv 1 1 pt. 0
  5. Avatar for 01010011111 145. 01010011111 Lv 1 1 pt. 0
  6. Avatar for Simek 146. Simek Lv 1 1 pt. 0
  7. Avatar for lconor 147. lconor Lv 1 1 pt. 0
  8. Avatar for jluo215 148. jluo215 Lv 1 1 pt. 0
  9. Avatar for Hollinas 149. Hollinas Lv 1 1 pt. 0
  10. Avatar for Kevonni 150. Kevonni Lv 1 1 pt. 0

Comments


Bruno Kestemont Lv 1

However, PSIPRED prediction (bellow) is quite useful to help to fit into the density somewhere (but the density gives a quite different pattern after all)

jeff101 Lv 1

In Puzzle 1598, if you are in the Original Interface using
the Rainbow color scheme, you can find Note 19 by Tabbing
on the blue end of the protein. A window called "Segment
Information" will appear for the segment you Tabbed on.
You can then use the left or right arrow key to move to
the "Segment Information" window for Isoleucine 19. At the
bottom of this window is a section called "Notes". You can
paste the desired secondary structure (listed above) in the
"Notes" section. The little trash can next to the "Notes"
section clears this section's contents.