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2424: Electron Density Reconstruction 80

Closed since about 2 years ago

Novice Overall Prediction Electron Density

Summary

Created
February 22, 2024
Expires
Max points
100
Description

The structure of this protein has already been solved and published, but close inspection suggests that there are some problems with the published solution. We'd like to see if Foldit players can use the same electron density data to reconstruct a better model. There's two copies of two chains each in this structure, two of which are quite short.

Sequence
A, C: MGKTNDWLDFDQLAEEKVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKAF. B,D: FRSKGEELFT

Top groups

  1. Avatar for Kotocycle 11. Kotocycle 1 pt. 34,920
  2. Avatar for BOINC@Poland 12. BOINC@Poland 1 pt. 34,740
  3. Avatar for BIOTF345 13. BIOTF345 1 pt. 29,766
  4. Avatar for SHELL 14. SHELL 1 pt. 29,061
  5. Avatar for BIOF215 15. BIOF215 1 pt. 28,324
  6. Avatar for AlphaFold 16. AlphaFold 1 pt. 21,059
  7. Avatar for BioInformatics2024 17. BioInformatics2024 1 pt. 19,640
  1. Avatar for 0mkar 61. 0mkar Lv 1 4 pts. 29,730
  2. Avatar for xxmalouinxx 62. xxmalouinxx Lv 1 3 pts. 29,690
  3. Avatar for mahatva_16 63. mahatva_16 Lv 1 3 pts. 29,610
  4. Avatar for aaronrockmenezes 64. aaronrockmenezes Lv 1 3 pts. 29,299
  5. Avatar for adi_kodz 65. adi_kodz Lv 1 3 pts. 29,182
  6. Avatar for jaid 66. jaid Lv 1 3 pts. 29,166
  7. Avatar for JackONeill12 67. JackONeill12 Lv 1 2 pts. 29,160
  8. Avatar for nicobul 68. nicobul Lv 1 2 pts. 29,148
  9. Avatar for harshil0808 69. harshil0808 Lv 1 2 pts. 29,124
  10. Avatar for Ambar 70. Ambar Lv 1 2 pts. 29,120

Comments

Serca Lv 1

Secondary structure prediction (JPred) is pretty close to what we see here.
LLLLLLLLLEEEEEELLLLLLHHHHHHHHHHHLLLLHHHHHHHHHHHHLLLLEEEEEELHHHHHHHHHHHHHHHHHLLLLLEEEEELLLLLLLLLLLLLLLLLLLLLHHHHHHHHLLLLLLLEEEEEELLLLLLHHHHHHHHHHHLLLLHHHHHHHHHHHHLLLLEEEEEELHHHHHHHHHHHHHHHHHLLLLLEEEEELLLLLLLL