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2424: Electron Density Reconstruction 80

Closed since about 2 years ago

Novice Overall Prediction Electron Density

Summary

Created
February 22, 2024
Expires
Max points
100
Description

The structure of this protein has already been solved and published, but close inspection suggests that there are some problems with the published solution. We'd like to see if Foldit players can use the same electron density data to reconstruct a better model. There's two copies of two chains each in this structure, two of which are quite short.

Sequence
A, C: MGKTNDWLDFDQLAEEKVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKAF. B,D: FRSKGEELFT

Top groups

  1. Avatar for Kotocycle 11. Kotocycle 1 pt. 34,920
  2. Avatar for BOINC@Poland 12. BOINC@Poland 1 pt. 34,740
  3. Avatar for BIOTF345 13. BIOTF345 1 pt. 29,766
  4. Avatar for SHELL 14. SHELL 1 pt. 29,061
  5. Avatar for BIOF215 15. BIOF215 1 pt. 28,324
  6. Avatar for AlphaFold 16. AlphaFold 1 pt. 21,059
  7. Avatar for BioInformatics2024 17. BioInformatics2024 1 pt. 19,640
  1. Avatar for f20212938 71. f20212938 Lv 1 2 pts. 29,108
  2. Avatar for shruty 72. shruty Lv 1 2 pts. 29,099
  3. Avatar for Shireen793 73. Shireen793 Lv 1 2 pts. 29,089
  4. Avatar for chandrika_21 74. chandrika_21 Lv 1 1 pt. 29,084
  5. Avatar for saro p 75. saro p Lv 1 1 pt. 29,074
  6. Avatar for U202342273 76. U202342273 Lv 1 1 pt. 29,061
  7. Avatar for Satyam.kr 77. Satyam.kr Lv 1 1 pt. 29,052
  8. Avatar for R0hit 78. R0hit Lv 1 1 pt. 29,050
  9. Avatar for furi0us 79. furi0us Lv 1 1 pt. 29,036
  10. Avatar for vinsi 80. vinsi Lv 1 1 pt. 29,030

Comments

Serca Lv 1

Secondary structure prediction (JPred) is pretty close to what we see here.
LLLLLLLLLEEEEEELLLLLLHHHHHHHHHHHLLLLHHHHHHHHHHHHLLLLEEEEEELHHHHHHHHHHHHHHHHHLLLLLEEEEELLLLLLLLLLLLLLLLLLLLLHHHHHHHHLLLLLLLEEEEEELLLLLLHHHHHHHHHHHLLLLHHHHHHHHHHHHLLLLEEEEEELHHHHHHHHHHHHHHHHHLLLLLEEEEELLLLLLLL