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246: Mini-CASP 15-Freestyle B

Closed since about 16 years ago

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Summary

Created
January 13, 2010
Expires
Max points
100
Description

Here is Mini-CASP 15 again, this time with the secondary structure predictions posted in the puzzle comments. Please try to use the secondary structure predictions for this puzzle so that we can compare the results to Freestyle A once the native is released. Thanks!

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  1. Avatar for Hungary 21. Hungary 1 pt. 8,563
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  3. Avatar for marie_s 13. marie_s Lv 1 72 pts. 9,154
  4. Avatar for drjr 14. drjr Lv 1 70 pts. 9,124
  5. Avatar for dislyxec 15. dislyxec Lv 1 68 pts. 9,118
  6. Avatar for Deleted player 16. Deleted player pts. 9,104
  7. Avatar for Jim Fraser 17. Jim Fraser Lv 1 64 pts. 9,098
  8. Avatar for mimi 18. mimi Lv 1 62 pts. 9,096
  9. Avatar for Dolichwier 19. Dolichwier Lv 1 61 pts. 9,089
  10. Avatar for Enzyme 20. Enzyme Lv 1 59 pts. 9,082

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Alanine at residue 10 is highly predicted to be part of a helix. However, the two Valines at residues 40 and 41 are both predicted to have an equal probability of being in a sheet or loop!