Placeholder image of a protein
Icon representing a puzzle

434: De-novo Freestyle 9

Closed since over 14 years ago

Advanced Overall Prediction

Summary

Created
June 27, 2011
Expires
Max points
100
Description

We are giving you this currently unsolved protein as an extended chain. Use all your skills to fold it up as best as you can. The secondary structure predictions are posted in the puzzle comments, but we have included them in the starting structure as well.

Top groups

  1. Avatar for foldeRNA
    1. foldeRNA
    100 pts. 11,066
  2. Avatar for Void Crushers 2. Void Crushers 85 pts. 10,860
  3. Avatar for Contenders 3. Contenders 71 pts. 10,849
  4. Avatar for Anthropic Dreams 4. Anthropic Dreams 60 pts. 10,816
  5. Avatar for Go Science 5. Go Science 49 pts. 10,659
  6. Avatar for Deleted group 6. Deleted group pts. 10,651
  7. Avatar for L'Alliance Francophone 7. L'Alliance Francophone 33 pts. 10,497
  8. Avatar for Russian team 8. Russian team 27 pts. 10,419
  9. Avatar for Freedom Folders 9. Freedom Folders 22 pts. 10,400
  10. Avatar for SETI.Germany 10. SETI.Germany 17 pts. 10,319
  1. Avatar for Museka 31. Museka Lv 1 53 pts. 10,497
  2. Avatar for johnmitch 32. johnmitch Lv 1 52 pts. 10,494
  3. Avatar for Jim Fraser 33. Jim Fraser Lv 1 51 pts. 10,494
  4. Avatar for Deleted player 34. Deleted player pts. 10,493
  5. Avatar for tallguy-13088 35. tallguy-13088 Lv 1 48 pts. 10,490
  6. Avatar for BootsMcGraw 36. BootsMcGraw Lv 1 47 pts. 10,488
  7. Avatar for mat747 37. mat747 Lv 1 46 pts. 10,488
  8. Avatar for jermainiac 38. jermainiac Lv 1 45 pts. 10,463
  9. Avatar for TheGUmmer 39. TheGUmmer Lv 1 44 pts. 10,452
  10. Avatar for Origami314 40. Origami314 Lv 1 43 pts. 10,439

Comments

beta_helix Staff Lv 1

These secondary structure predictions have been pre-loaded into this freestyle puzzle.

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Leucine at residue 18 is highly predicted to be part of a sheet. However, the Leucines at residue 122-123 are highly predicted to be in a helix.