444: De-novo Freestyle 11

Closed since over 14 years ago

Summary

• Created: August 03, 2011
• Expires: August 10, 2011 at 16:00 UTC
• Max points: 100

Description

We are giving you this currently unsolved protein as an extended chain. Use all your skills to fold it up as best as you can. The secondary structure predictions are posted in the puzzle comments, but we have included them in the starting structure as well.

Top groups

• 1. foldeRNA 100 pts. 10,269
• 2. Contenders 82 pts. 10,249
• 3. Anthropic Dreams 66 pts. 10,174
• 4. Void Crushers 53 pts. 10,159
• 5. Go Science 42 pts. 10,026
• 6. L'Alliance Francophone 33 pts. 9,958
• 7. Natural Abilities 26 pts. 9,942
• 8. SETI.Germany 20 pts. 9,905
• 9. Russian team 15 pts. 9,903
• 10. Deleted group pts. 9,831

Top soloists

• 41. TheGUmmer 36 pts. 9,916
• 42. Schleicher 35 pts. 9,905
• 43. SKSbell 34 pts. 9,903
• 44. Grom 33 pts. 9,903
• 45. Mark- 32 pts. 9,874
• 46. heather-1 31 pts. 9,858
• 47. bendbob 30 pts. 9,851
• 48. Jim Fraser 29 pts. 9,843
• 49. auntdeen 28 pts. 9,838
• 50. lynnai 28 pts. 9,832

Comments

[beta_helix]

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Leucine at residue 79 is highly predicted to be part of a helix. However, the Isoleucine at residue 65 has an equal probability of being anything.